Burkholderia cenocepacia AU 1054, BCEN_RS04580

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF46785		IPR036390	Winged helix DNA-binding domain superfamily	1	109	3.96E-23
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	18	29	2.1E-6
Gene3D	G3DSA:3.40.190.290				91	295	2.8E-37
Pfam	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family	IPR000847	Transcription regulator HTH, LysR	4	61	6.7E-19
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	39	50	2.1E-6
Coils	Coil				22	42	-
SUPERFAMILY	SSF53850				87	292	1.71E-42
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	1	90	1.4E-24
Pfam	PF03466	LysR substrate binding domain	IPR005119	LysR, substrate-binding	86	289	5.8E-45
ProSiteProfiles	PS50931	LysR-type HTH domain profile.	IPR000847	Transcription regulator HTH, LysR	1	58	31.55
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	29	39	2.1E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.