Burkholderia cenocepacia AU 1054, BCEN_RS04575

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00863
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004813 alanine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50860
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00863
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50860
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0043039 tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00863
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006419 alanyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50860
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00970 Aminoacyl-tRNA biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil 724 758 -
SUPERFAMILY SSF50447 IPR009000 Translation protein, beta-barrel domain superfamily 453 552 1.08E-18
Gene3D G3DSA:3.10.310.40 763 871 8.8E-32
Coils Coil 782 802 -
PRINTS PR00980 Alanyl-tRNA synthetase signature IPR002318 Alanine-tRNA ligase, class IIc 232 245 1.6E-32
SUPERFAMILY SSF101353 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily 252 444 6.41E-62
PRINTS PR00980 Alanyl-tRNA synthetase signature IPR002318 Alanine-tRNA ligase, class IIc 302 315 1.6E-32
SMART SM00863 IPR012947 Threonyl/alanyl tRNA synthetase, SAD 653 695 2.8E-17
Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IPR012947 Threonyl/alanyl tRNA synthetase, SAD 653 695 1.1E-14
CDD cd00673 AlaRS_core 3 247 1.13334E-136
Gene3D G3DSA:3.30.54.20 624 676 1.1E-48
ProSiteProfiles PS50860 Alanyl-transfer RNA synthetases family profile. IPR018165 Alanyl-tRNA synthetase, class IIc, core domain 1 708 130.27
PRINTS PR00980 Alanyl-tRNA synthetase signature IPR002318 Alanine-tRNA ligase, class IIc 278 294 1.6E-32
Gene3D G3DSA:2.40.30.130 453 552 2.3E-10
SUPERFAMILY SSF55681 2 251 6.96E-107
TIGRFAM TIGR00344 alaS: alanine--tRNA ligase IPR002318 Alanine-tRNA ligase, class IIc 5 853 0.0
SUPERFAMILY SSF55186 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily 552 708 3.92E-48
PRINTS PR00980 Alanyl-tRNA synthetase signature IPR002318 Alanine-tRNA ligase, class IIc 205 216 1.6E-32
PRINTS PR00980 Alanyl-tRNA synthetase signature IPR002318 Alanine-tRNA ligase, class IIc 74 85 1.6E-32
Gene3D G3DSA:3.30.980.10 562 696 1.1E-48
Gene3D G3DSA:3.30.930.10 1 248 6.1E-118
Pfam PF01411 tRNA synthetases class II (A) IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal 5 556 6.2E-222
Hamap MF_00036_B Alanine--tRNA ligase [alaS]. IPR023033 Alanine-tRNA ligase, eukaryota/bacteria 1 874 203.995
Pfam PF02272 DHHA1 domain IPR003156 DHHA1 domain 732 870 4.8E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.