Burkholderia cenocepacia AU 1054, BCEN_RS04500

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00039	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00039	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF03466	LysR substrate binding domain	IPR005119	LysR, substrate-binding	92	297	1.1E-42
CDD	cd08422	PBP2_CrgA_like			95	293	4.25053E-83
SUPERFAMILY	SSF46785		IPR036390	Winged helix DNA-binding domain superfamily	4	114	2.68E-23
SUPERFAMILY	SSF53850				92	302	1.99E-44
Gene3D	G3DSA:3.40.190.10				166	268	4.7E-65
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	22	33	1.2E-7
Gene3D	G3DSA:3.40.190.10				95	295	4.7E-65
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	6	94	6.1E-24
ProSiteProfiles	PS50931	LysR-type HTH domain profile.	IPR000847	Transcription regulator HTH, LysR	5	62	29.137
Pfam	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family	IPR000847	Transcription regulator HTH, LysR	8	66	8.8E-21
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	33	43	1.2E-7
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	43	54	1.2E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.