Burkholderia cenocepacia AU 1054, BCEN_RS04295
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCGGGCCAGC-N100-GCTGGCCCGC | 944006 | 944125 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCGGGCCAGC-N100-GCTGGCCCGC | 944006 | 944125 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AGCGCGCCGC-N89-GCGGCGCGCT | 944729 | 944837 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: AGCGCGCCGC-N89-GCGGCGCGCT | 944729 | 944837 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGTGACCGCGC-N50-GCGCGGTCACG | 945147 | 945218 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGTGACCGCGC-N50-GCGCGGTCACG | 945147 | 945218 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Rho-independent transcription terminator TERM 313 | 945219 | 945244 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Inverted repeat: CGTGACCGCGC-N50-GCGCGGTCACG | 945147 | 945218 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGTGACCGCGC-N50-GCGCGGTCACG | 945147 | 945218 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGGCGGCGCGC-N83-GCGCGCCGCCG | 945281 | 945385 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGGCGGCGCGC-N83-GCGCGCCGCCG | 945281 | 945385 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |