Burkholderia cenocepacia AU 1054, BCEN_RS03745

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF47413	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50932	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family	IPR001761	Periplasmic binding protein/LacI sugar binding domain	62	314	3.8E-33
ProSiteProfiles	PS50932	LacI-type HTH domain profile.	IPR000843	LacI-type HTH domain	3	57	25.282
CDD	cd06282	PBP1_GntR_like_2			62	328	3.24722E-135
Gene3D	G3DSA:3.40.50.2300				63	321	6.2E-66
Pfam	PF00356	Bacterial regulatory proteins, lacI family	IPR000843	LacI-type HTH domain	4	49	1.7E-12
Gene3D	G3DSA:3.40.50.2300				160	289	6.2E-66
SUPERFAMILY	SSF53822		IPR028082	Periplasmic binding protein-like I	59	321	4.71E-66
Gene3D	G3DSA:1.10.260.40				1	59	6.4E-18
CDD	cd01392	HTH_LacI	IPR000843	LacI-type HTH domain	6	57	6.58292E-14
SMART	SM00354		IPR000843	LacI-type HTH domain	2	72	9.6E-22
SUPERFAMILY	SSF47413		IPR010982	Lambda repressor-like, DNA-binding domain superfamily	3	60	8.44E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.