Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS29060 (rmlC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0008830 | dTDP-4-dehydrorhamnose 3,5-epimerase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00908
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| TIGRFAM | TIGR01221 | rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase | IPR000888 | dTDP-4-dehydrorhamnose 3,5-epimerase-related | 5 | 179 | 1.5E-83 |
| Gene3D | G3DSA:2.60.120.10 | IPR014710 | RmlC-like jelly roll fold | 3 | 182 | 1.9E-75 | |
| Pfam | PF00908 | dTDP-4-dehydrorhamnose 3,5-epimerase | IPR000888 | dTDP-4-dehydrorhamnose 3,5-epimerase-related | 8 | 177 | 1.6E-72 |
| SUPERFAMILY | SSF51182 | IPR011051 | RmlC-like cupin domain superfamily | 3 | 181 | 8.9E-77 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.