Burkholderia cenocepacia H111

Strain Overview
Organism Name Burkholderia cenocepacia H111
Species Burkholderia cenocepacia
Strain H111
Subspecific Genetic Lineage genomovar III
Description/Title Non-tumor DNA sample from Blood of a human male participant in the dbGaP study "Sequencing of Targeted Genomic Regions Associated with Smoking"
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Annotated Genes 6815
References PMID:12406218
Partial Genes 22
Cross-References
NCBI BioSample Accession SAMEA3138403
NCBI Biosample ID 3215849
NCBI Taxonomy ID 9606
GOLD Accession
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 6815
CDS 6730
tRNA 65
pseudo 62
rRNA 18
ncRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2986
Cytoplasmic Membrane 1460
Periplasmic 216
Outer Membrane 164
Extracellular 88
Unknown 1693
Unknown (This protein may have multiple localization sites) 208
Flagellar 18
Fimbrial 5
T3SS 2
Sample Provider
Name
E-mail
Institution European Bioinformatics Institute
Date Collected 1993
Geographic Location
Location Name Germany
Host Information
Host Species Taxonomic Name Homo sapiens
Host Species Common Name human
Host Species Taxonomy ID 9606
Host Species Disease Cystic fibrosis

Replicons

Name Length GC
Burkholderia cenocepacia H111 chromosome 1 complete genome. 3572953 bp 67.1%
Replicon details
Burkholderia cenocepacia H111 chromosome 2, complete genome. 3102677 bp 67.4%
Replicon details
Burkholderia cenocepacia H111 chromosome 3, complete genome. 1039263 bp 67.8%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

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TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF

Download Intergenic Region Annotations

File also contains gene annotations

GTF