Burkholderia multivorans ATCC 17616

Strain Overview
Organism Name Burkholderia multivorans ATCC 17616
Species Burkholderia multivorans
Strain ATCC 17616
Subspecific Genetic Lineage
Description/Title Sample of BURKHOLDERIA MULTIVORANS ATCC 17616
Scaffolds
Contigs
Contig N50
Assembly Level Complete Genome
Percent GC
Annotated Genes 6346
References
Partial Genes
Cross-References
NCBI BioSample Accession SAMN00623032
NCBI Biosample ID 623032
NCBI Taxonomy ID 395019
GOLD Accession
NCBI Bioprojects
NCBI Sequencing Assay
NCBI Assembly
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 6372
CDS 6253
tRNA 65
rRNA 15
pseudo 12
ncRNA 2
tmRNA 1

Subcellular Localization

Localization Count
Cytoplasmic 2795
Cytoplasmic Membrane 1338
Periplasmic 210
Outer Membrane 145
Extracellular 72
Unknown 1849
Unknown (This protein may have multiple localization sites) 187
Flagellar 17
Fimbrial 6
T3SS 2

Breakdown by COG Category

Feature Count
General function prediction only 1176
Transcription 1085
Amino acid transport and metabolism 1054
Function unknown 951
Energy production and conversion 735
Carbohydrate transport and metabolism 713
Cell wall/membrane/envelope biogenesis 683
Inorganic ion transport and metabolism 557
Signal transduction mechanisms 530
Replication, recombination and repair 523
Lipid transport and metabolism 440
Coenzyme transport and metabolism 422
Translation, ribosomal structure and biogenesis 367
Posttranslational modification, protein turnover, chaperones 335
Secondary metabolites biosynthesis, transport and catabolism 318
Intracellular trafficking, secretion, and vesicular transport 300
Nucleotide transport and metabolism 206
Cell motility 204
Defense mechanisms 119
Cell cycle control, cell division, chromosome partitioning 78
Chromatin structure and dynamics 6
RNA processing and modification 2
Extracellular structures 1
Sample Provider
Name
E-mail
Institution Joint Genome Institute, U.S. Department of Energy
Date Collected
Geographic Location
Host Information
Host Species Taxonomic Name

Replicons

Name Length GC
Burkholderia multivorans ATCC 17616 chromosome 1, complete sequence. 3448466 bp 66.9%
Replicon details
Burkholderia multivorans ATCC 17616 chromosome 2, complete sequence. 2472928 bp 67.1%
Replicon details
Burkholderia multivorans ATCC 17616 chromosome 3, complete sequence. 919806 bp 65.8%
Replicon details
Burkholderia multivorans ATCC 17616 plasmid pBMUL01, complete sequence. 167422 bp 61.3%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

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TAB CSV GBK EMBL GFF3 GFF3 + sequence GTF Orthologs

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File also contains gene annotations

GTF