Motif View

Internal ID 1761259
Source Database TransTermHP TERM 1023
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1023
Sequence GCGGGCTAATAAGCCCGC
Look for more occurrences
Start 3254878
End 3254895
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGCGTGTGGTTTTTA(5' tail) GCGGGCT(5' stem) AATA(loop) AGCCCGC(3' stem) TTTTTTTCGTCCATC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685