Motif View

Internal ID 1761212
Source Database TransTermHP TERM 951
Feature Type terminator
Name
Rho-independent transcription terminator TERM 951
Sequence CGCCACGTGTCCCACGTGGCA
Look for more occurrences
Start 3040701
End 3040721
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACACCTTAAAACAAA(5' tail) TGCCACGTG(5' stem) GGA(loop) CACGTGGCG(3' stem) ATTTTTGGCAGGGGC(3' tail). Confidence: 93. opp_overlap 3040700 3040701 3040702, overlap 3040702

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685