Motif View

Internal ID 1761197
Source Database TransTermHP TERM 934
Feature Type terminator
Name
Rho-independent transcription terminator TERM 934
Sequence CCGCCGGTGCACTGCGTGCCCGGCGG
Look for more occurrences
Start 2997757
End 2997782
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGTTACAAAACAAAA(5' tail) CCGCCGG-GCAC(5' stem) GCA(loop) GTGCACCGGCGG(3' stem) TCTGATAGTCGGACG(3' tail). Confidence: 100. gap 1, opp_overlap 2997757

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685