Motif View

Internal ID 1761086
Source Database TransTermHP TERM 788
Feature Type terminator
Name
Rho-independent transcription terminator TERM 788
Sequence GCGCGAACCGTTGCAGTTCGCGC
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Start 2596070
End 2596092
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGACCATCCTATTAA(5' tail) GCGCGAACCG(5' stem) TTG(loop) CAGTTCGCGC(3' stem) TTTTTTATTACCCCG(3' tail). Confidence: 100. opp_overlap 2596070

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685