Motif View

Internal ID 1761085
Source Database TransTermHP TERM 786
Feature Type terminator
Name
Rho-independent transcription terminator TERM 786
Sequence TCCTCACTCAGTGGACTACGCTGAGTGAGGA
Look for more occurrences
Start 2596018
End 2596048
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCAGAAGGACAAAA(5' tail) TCCTCACTCAGCG(5' stem) TAGTC(loop) CACTGAGTGAGGA(3' stem) TCGGGCTGACCATCC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685