Motif View

Internal ID 1761053
Source Database TransTermHP TERM 734
Feature Type terminator
Name
Rho-independent transcription terminator TERM 734
Sequence CGGCTTGCGACGCACACGTCACAAGCCG
Look for more occurrences
Start 2434286
End 2434313
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCGCCAAAGCAAAAA(5' tail) CGGCTTGCGACG(5' stem) CACA(loop) CGTCACAAGCCG(3' stem) TTTTTCTTTGACCGC(3' tail). Confidence: 100. opp_overlap 2434286, overlap 2434272 2434272

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685