Motif View

Internal ID 1761051
Source Database TransTermHP TERM 730
Feature Type terminator
Name
Rho-independent transcription terminator TERM 730
Sequence CCTCGCTTCGTGCGAGG
Look for more occurrences
Start 2431190
End 2431206
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGAAAGGAAAAGAA(5' tail) CCTCGC(5' stem) TTCGT(loop) GCGAGG(3' stem) TTTTTTTCGTCCTGG(3' tail). Confidence: 100. opp_overlap 2431190 2431187 2431182 2431181

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685