Motif View

Internal ID 1761045
Source Database TransTermHP TERM 722
Feature Type terminator
Name
Rho-independent transcription terminator TERM 722
Sequence GCGAAGCGGCAACGCTTCGC
Look for more occurrences
Start 2415547
End 2415566
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAGCATGCGCAGAAA(5' tail) GCGAAGCG(5' stem) GCAA(loop) CGCTTCGC(3' stem) TTTTTGCACAATCGG(3' tail). Confidence: 100. opp_overlap 2415547 2415537 2415534

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685