Motif View

Internal ID 1601226
Source Database TransTermHP TERM 391
Feature Type terminator
Name
Rho-independent transcription terminator TERM 391
Sequence GCGCCCTTCCGGGCGC
Look for more occurrences
Start 1132579
End 1132594
Strand -
Genomic Context
Replicon Burkholderia glumae PG1 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTCCAAAAAGAAAAA(5' tail) GCGCCC(5' stem) GGAA(loop) GGGCGC(3' stem) TTTTCGTGCAGGTTG(3' tail). Confidence: 100. opp_overlap 1132579

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685