Burkholderia cenocepacia J2315 Functional Domain Annotations

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IMP: This is a list of Burkholderia functional domain predictions made using the InterProScan software package.

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Locus Tag Product External DB External Signature Accession Signature Description InterPro Accession AA Start AA Stop Score InterPro Annotation Version
BCAL3486 RNA polymerase sigma factor SigJ Pfam PF04542 Sigma-70 region 2 IPR007627 23 84 1.3E-13 RNA polymerase sigma-70 region 2 5.36-75.0
BCAL3502 flagellar biosynthesis protein FliQ TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ IPR006305 1 84 8.6E-30 Flagellar biosynthesis protein FliQ 5.36-75.0
BCAM0009 putative DNA-binding protein CDD HTH_XRE IPR001387 27 84 5.49275E-16 Cro/C1-type helix-turn-helix domain 5.36-75.0
BCAM0009 putative DNA-binding protein SMART SM00530 IPR001387 29 84 2.2E-16 Cro/C1-type helix-turn-helix domain 5.36-75.0
BCAM0009 putative DNA-binding protein ProSiteProfiles PS50943 Cro/C1-type HTH domain profile. IPR001387 30 84 16.594 Cro/C1-type helix-turn-helix domain 5.36-75.0
BCAM0009 putative DNA-binding protein Pfam PF01381 Helix-turn-helix IPR001387 30 84 1.5E-15 Cro/C1-type helix-turn-helix domain 5.36-75.0
BCAM0239a N-acylhomoserine lactone synthase PRINTS PR01549 Autoinducer synthesis protein signature IPR001690 66 84 2.6E-16 Autoinducer synthase 5.36-75.0
BCAM0342 LysR family regulatory protein SUPERFAMILY SSF46785 IPR036390 4 84 3.7E-21 Winged helix DNA-binding domain superfamily 5.36-75.0
BCAM0465 major facilitator superfamily protein ProSitePatterns PS00216 Sugar transport proteins signature 1. IPR005829 68 84 - Sugar transporter, conserved site 5.36-75.0
BCAM0482 putative methylated-DNA--protein-cysteine methyltransferase SUPERFAMILY SSF53155 IPR036631 6 84 4.71E-15 Methylated DNA-protein cysteine methyltransferase domain superfamily 5.36-75.0
BCAM0514 TetR family regulatory protein SUPERFAMILY SSF46689 IPR009057 7 84 2.99E-18 Homeobox-like domain superfamily 5.36-75.0
BCAM0575 LysR family regulatory protein Gene3D G3DSA:1.10.10.10 IPR036388 1 84 9.9E-20 Winged helix-like DNA-binding domain superfamily 5.36-75.0
BCAM0590 putative glutathione S-transferase Gene3D G3DSA:3.40.30.10 1 84 8.8E-29 5.36-75.0
BCAM0595 LysR family regulatory protein SUPERFAMILY SSF46785 IPR036390 1 84 1.8E-21 Winged helix DNA-binding domain superfamily 5.36-75.0
BCAM0700 TetR family regulatory protein ProSiteProfiles PS50977 TetR-type HTH domain profile. IPR001647 24 84 15.504 DNA-binding HTH domain, TetR-type 5.36-75.0
BCAM0751 LysR family regulatory protein SUPERFAMILY SSF46785 IPR036390 1 84 5.2E-27 Winged helix DNA-binding domain superfamily 5.36-75.0
BCAM0801 LysR family regulatory protein SUPERFAMILY SSF46785 IPR036390 4 84 1.11E-18 Winged helix DNA-binding domain superfamily 5.36-75.0
BCAM0806 putative cat operon regulatory protein Gene3D G3DSA:1.10.10.10 IPR036388 1 84 1.2E-30 Winged helix-like DNA-binding domain superfamily 5.36-75.0
BCAM0879 putative glutathione S-transferase SUPERFAMILY SSF52833 IPR036249 1 84 8.42E-21 Thioredoxin-like superfamily 5.36-75.0
BCAM0977 AnsC family regulatory protein ProSiteProfiles PS50956 AsnC-type HTH domain profile. IPR000485 8 84 31.388 AsnC-type HTH domain 5.36-75.0