Burkholderia cenocepacia J2315 Functional Domain Annotations

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IMP: This is a list of Burkholderia functional domain predictions made using the InterProScan software package.

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Locus Tag Product External DB External Signature Accession Signature Description InterPro Accession AA Start AA Stop Score InterPro Annotation Version
BCAM2812 LysR family regulatory protein Pfam PF03466 LysR substrate binding domain IPR005119 112 309 4.4E-29 LysR, substrate-binding 5.36-75.0
BCAM2812 LysR family regulatory protein CDD PBP2_GcdR_TrpI_HvrB_AmpR_like 114 304 5.21374E-60 5.36-75.0
BCAM2812 LysR family regulatory protein SUPERFAMILY SSF46785 IPR036390 27 133 7.68E-19 Winged helix DNA-binding domain superfamily 5.36-75.0
BCAM2812 LysR family regulatory protein PRINTS PR00039 LysR bacterial regulatory protein HTH signature IPR000847 65 76 9.7E-5 Transcription regulator HTH, LysR 5.36-75.0
BCAM2812 LysR family regulatory protein PRINTS PR00039 LysR bacterial regulatory protein HTH signature IPR000847 44 55 9.7E-5 Transcription regulator HTH, LysR 5.36-75.0
BCAM2812 LysR family regulatory protein PRINTS PR00039 LysR bacterial regulatory protein HTH signature IPR000847 55 65 9.7E-5 Transcription regulator HTH, LysR 5.36-75.0
BCAM2812 LysR family regulatory protein Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPR000847 31 87 2.7E-17 Transcription regulator HTH, LysR 5.36-75.0
BCAM2812 LysR family regulatory protein Gene3D G3DSA:1.10.10.10 IPR036388 28 114 3.0E-20 Winged helix-like DNA-binding domain superfamily 5.36-75.0
BCAM2812 LysR family regulatory protein Gene3D G3DSA:3.40.190.10 122 304 4.8E-51 5.36-75.0
BCAM2812 LysR family regulatory protein ProSiteProfiles PS50931 LysR-type HTH domain profile. IPR000847 27 84 24.093 Transcription regulator HTH, LysR 5.36-75.0
BCAM2812 LysR family regulatory protein Gene3D G3DSA:3.40.190.10 183 279 4.8E-51 5.36-75.0
BCAM2814 putative ATP-dependent RNA helicase RhlE CDD DEADc 12 208 1.48232E-96 5.36-75.0
BCAM2814 putative ATP-dependent RNA helicase RhlE ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. IPR014001 32 207 31.333 Helicase superfamily 1/2, ATP-binding domain 5.36-75.0
BCAM2814 putative ATP-dependent RNA helicase RhlE ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile. IPR001650 218 380 21.349 Helicase, C-terminal 5.36-75.0
BCAM2814 putative ATP-dependent RNA helicase RhlE Gene3D G3DSA:3.40.50.300 213 397 4.4E-46 5.36-75.0
BCAM2814 putative ATP-dependent RNA helicase RhlE Pfam PF00270 DEAD/DEAH box helicase IPR011545 25 193 3.1E-50 DEAD/DEAH box helicase domain 5.36-75.0
BCAM2814 putative ATP-dependent RNA helicase RhlE MobiDBLite consensus disorder prediction 371 484 - 5.36-75.0
BCAM2814 putative ATP-dependent RNA helicase RhlE Pfam PF00271 Helicase conserved C-terminal domain IPR001650 234 339 7.3E-27 Helicase, C-terminal 5.36-75.0
BCAM2814 putative ATP-dependent RNA helicase RhlE CDD SF2_C_DEAD 219 348 8.84211E-58 5.36-75.0
BCAM2814 putative ATP-dependent RNA helicase RhlE SMART SM00490 IPR001650 258 339 2.6E-32 Helicase, C-terminal 5.36-75.0