Burkholderia mallei NCTC 10229, BMA10229_2083 (bopA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Burkholderia mallei NCTC 10229
GCF_000015605.1|latest |
| Locus Tag |
BMA10229_2083
|
| NCBI Locus Tag | BMA10229_RS09030 |
| Name |
bopA
|
| Replicon | chromosome II |
| Genomic location | 2134228 - 2135766 (+ strand) |
Cross-References
| RefSeq | WP_004187505.1 |
| GI | 124381944 |
| Entrez | 4790372 |
| GI | 124381944 |
| INSDC | ABN00177.2 |
| NCBI Locus Tag | BMA10229_RS09030 |
| NCBI Old Locus Tag | BMA10229_2083 |
| RefSeq | WP_004187505.1 |
| UniParc | UPI0000441475 |
| UniProtKB Acc | A2S1Q9 |
| UniProtKB Acc | A2S1Q9 |
| UniProtKB ID | A2S1Q8_BURM9 |
| UniProtKB ID | BOPA_BURM9 |
| UniRef100 | UniRef100_A3MCH8 |
| UniRef50 | UniRef50_A3MCH8 |
| UniRef90 | UniRef90_A3MCH8 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
BopA protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 24.44 |
| Kyte-Doolittle Hydrophobicity Value | -0.526 |
| Molecular Weight (kDa) | 56799.6 |
| Isoelectric Point (pI) | 10.40 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
| Look for predicted 3D structure in AlphaFold DB: Search |
| Look for predicted 3D structure in AlphaFold DB: Search |
Virulence Evidence
| Source 1 | |
| Database | VFDB : VF0428 |
| Category | T3SS-3 |
| Evidence |
ECO:0000250
sequence similarity evidence used in manual assertion
|
| Host Organism | |
| Notes | |
| Annotation transferred from | Burkholderia pseudomallei K96243 |
| Reference | 17984080 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 3 genera
|
Orthologs/Comparative Genomics
| Burkholderia Ortholog Group |
BG019823 (317 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: BMA10229_2083
Search term: bopA
Search term: BopA protein
|
Human Homologs
References
|
Unraveling type III secretion systems in the highly versatile Burkholderia pseudomallei.
Sun GW, Gan YH
Trends Microbiol 2010 Dec;18(12):561-8
PubMed ID: 20951592
|