Burkholderia cenocepacia AU 1054, BCEN_RS05630
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Burkholderia cenocepacia AU 1054
GCF_000014085.1|latest |
| Locus Tag |
BCEN_RS05630
|
| NCBI Old Locus Tag | Bcen_1143 |
| Name |
|
| Replicon | chromosome 1 |
| Genomic location | 1243292 - 1246432 (+ strand) |
Cross-References
| RefSeq | WP_011545362.1 |
| GI | 499864628 |
| NCBI Locus Tag | BCEN_RS05630 |
| NCBI Old Locus Tag | Bcen_1143 |
| RefSeq | WP_011545362.1 |
Product
| Feature Type | CDS |
| Coding Frame | NA |
| Product Name |
multidrug efflux RND transporter permease subunit
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 10.16 |
| Kyte-Doolittle Hydrophobicity Value | 0.341 |
| Molecular Weight (kDa) | 111603.5 |
| Isoelectric Point (pI) | 9.44 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AMR gene predictions from CARD database
Identified using the Resistance Gene Identifier (RGI)
| Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
| amrB | amrB is the membrane fusion protein of the AmrAB-OprM multidrug efflux complex. | ARO:3002983 | protein homolog model | Strict | 0.0 | 86.69 | 1.2.1 |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Burkholderia Ortholog Group |
BG001444 (2569 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: BCEN_RS05630
Search term: multidrug efflux RND transporter permease subunit
|
Human Homologs
References
No references are associated with this feature.