Burkholderia cenocepacia J2315, BCAS0713

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAS0713
NCBI Locus Tag	QU43_RS72210
Name
Replicon	chromosome 3
Genomic location	779876 - 780709 (- strand)

Cross-References

RefSeq	WP_006482392.1
GI	197295546
Entrez	6804036
GI	197295546
INSDC	CAR57648.1
NCBI Locus Tag	QU43_RS72210
NCBI Old Locus Tag	BCAS0713
RefSeq	WP_006482392.1,GeneID
UniParc	UPI00017BB281
UniProtKB Acc	B4EPA4
UniProtKB ID	B4EPA4_BURCJ
UniRef100	UniRef100_A0A0D1DNC3
UniRef50	UniRef50_F6AFA7
UniRef90	UniRef90_A0A088V734

Product

Feature Type	CDS
Coding Frame	1
Product Name	short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-1.08
Kyte-Doolittle Hydrophobicity Value	-0.166
Molecular Weight (kDa)	30066.8
Isoelectric Point (pI)	6.73

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 650 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG006930 (31 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAS0713 Search term: short chain dehydrogenase

Human Homologs

Ensembl 97, assembly GRCh38.p12	ENSP00000466058 retinol dehydrogenase 8 [Source:NCBI gene;Acc:50700] E-value: 1.6e-24 Percent Identity: 38.7
Ensembl 97, assembly GRCh38.p12	ENSP00000498711 retinol dehydrogenase 8 [Source:NCBI gene;Acc:50700] E-value: 1.6e-24 Percent Identity: 38.7

References