Burkholderia cenocepacia J2315, BCAL2757 (sodB)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL2757
NCBI Locus Tag	QU43_RS50400
Name	sodB
Replicon	chromosome 1
Genomic location	3028310 - 3028888 (- strand)

Cross-References

RefSeq	WP_006489396.1
GI	206561094
Entrez	6932770
GI	206561094
INSDC	CAR53057.1
NCBI Locus Tag	QU43_RS50400
NCBI Old Locus Tag	BCAL2757
RefSeq	WP_006489396.1,GeneID
UniParc	UPI00017B9876
UniProtKB Acc	B4E9F6
UniProtKB ID	B4E9F6_BURCJ
UniRef100	UniRef100_B4E9F6
UniRef50	UniRef50_O15905
UniRef90	UniRef90_B4E9F6

Product

Feature Type	CDS
Coding Frame	1
Product Name	superoxide dismutase SodB
Synonyms
Evidence for Translation
Charge (pH 7)	-3.57
Kyte-Doolittle Hydrophobicity Value	-0.210
Molecular Weight (kDa)	21128.5
Isoelectric Point (pI)	5.91

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 529 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG002406 (654 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL2757 Search term: sodB Search term: superoxide dismutase SodB

Human Homologs

Ensembl 97, assembly GRCh38.p12	ENSP00000446252 superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180] E-value: 4.7e-39 Percent Identity: 43.5
Ensembl 97, assembly GRCh38.p12	ENSP00000356022 superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180] E-value: 4.7e-39 Percent Identity: 43.5

References