Burkholderia cenocepacia J2315, BCAL1943 (rpsR)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL1943
NCBI Locus Tag	QU43_RS46260
Name	rpsR
Replicon	chromosome 1
Genomic location	2143707 - 2143982 (- strand)

Cross-References

RefSeq	WP_006486248.1
GI	206560307
Entrez	6934065
GI	206560307
INSDC	CAR52244.1
NCBI Locus Tag	QU43_RS46260
NCBI Old Locus Tag	BCAL1943
RefSeq	WP_006486248.1,GeneID
UniParc	UPI0000298DD9
UniProtKB Acc	B4EBH1
UniProtKB ID	RS18_BURCJ
UniRef100	UniRef100_B1JTF1
UniRef50	UniRef50_A4SVX8
UniRef90	UniRef90_B2JG20

Product

Feature Type	CDS
Coding Frame	1
Product Name	30S ribosomal protein S18
Synonyms
Evidence for Translation
Charge (pH 7)	12.43
Kyte-Doolittle Hydrophobicity Value	-1.016
Molecular Weight (kDa)	10639.2
Isoelectric Point (pI)	10.96

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 588 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG001705 (653 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL1943 Search term: rpsR Search term: 30S ribosomal protein S18

Human Homologs

References