Burkholderia cenocepacia J2315, BCAL1870 (tex)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL1870
NCBI Locus Tag	QU43_RS45895
Name	tex
Replicon	chromosome 1
Genomic location	2062917 - 2065241 (+ strand)

Cross-References

RefSeq	WP_006485902.1
GI	206560233
Entrez	6932088
GI	206560233
INSDC	CAR52170.1
NCBI Locus Tag	QU43_RS45895
NCBI Old Locus Tag	BCAL1870
RefSeq	WP_006485902.1,GeneID
UniParc	UPI00017B9569
UniProtKB Acc	B4EAG9
UniProtKB ID	B4EAG9_BURCJ
UniRef100	UniRef100_A0A0D1B8Y9
UniRef50	UniRef50_Q45388
UniRef90	UniRef90_Q39FS3

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative transcription accessory protein
Synonyms
Evidence for Translation
Charge (pH 7)	-5.89
Kyte-Doolittle Hydrophobicity Value	-0.298
Molecular Weight (kDa)	84559.3
Isoelectric Point (pI)	6.25

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 598 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG001635 (653 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL1870 Search term: tex Search term: putative transcription accessory protein

Human Homologs

Ensembl 97, assembly GRCh38.p12

ENSP00000263736 S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521] E-value: 2.6e-104 Percent Identity: 33.9

References