Burkholderia cenocepacia J2315, BCAL1865

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL1865
NCBI Locus TagQU43_RS45870
Name
Replicon chromosome 1
Genomic location 2057203 - 2058288 (- strand)

Cross-References

RefSeq YP_002230992.1
GI 206560228
Entrez 6932083
GI 206560228
INSDC CAR52165.1
NCBI Locus Tag QU43_RS45870
NCBI Old Locus Tag BCAL1865
RefSeq YP_002230992.1
UniParc UPI00017B9527
UniProtKB Acc B4EAG4
UniProtKB ID B4EAG4_BURCJ
UniRef100 UniRef100_B4EAG4
UniRef50 UniRef50_Q8XYX8
UniRef90 UniRef90_B1YR25

Product

Feature Type CDS
Coding Frame 1
Product Name
ribosomal large subunit pseudouridine synthase D
Synonyms
Evidence for Translation
Charge (pH 7) -10.46
Kyte-Doolittle Hydrophobicity Value -0.267
Molecular Weight (kDa) 39453.4
Isoelectric Point (pI) 5.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001630 (652 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL1865

Human Homologs

Ensembl 97, assembly GRCh38.p12
RNA pseudouridine synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
E-value: 6.5e-18
Percent Identity: 32.7
Ensembl 97, assembly GRCh38.p12
RNA pseudouridine synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
E-value: 6.5e-18
Percent Identity: 32.7

References

No references are associated with this feature.