Jan 25, 2011 |
BCAM0858
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM0858
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM0858
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM0859
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM0859
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 22, 2009 |
BCAM0859
|
Burkholderia cenocepacia
J2315 |
New product name: tyrosine autokinase BceF. New product name confidence: Class 1. New homology: 92% identity to BceF[B. cepacia IST408]. New evidence reference (PMID): 17114319.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Apr 30, 2018 |
BCAM0859
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 23435894. New PubMed ID: 25486990. New PubMed ID: 26590274. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM0860
|
Burkholderia cenocepacia
J2315 |
New product name: BceG. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4206.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM0860
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New GO Accession: GO:0016757(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM0860
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New GO accession: GO:0016757 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM0861
|
Burkholderia cenocepacia
J2315 |
New product name: BceH. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4207.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM0861
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New GO Accession: GO:0016757(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM0861
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New GO accession: GO:0016757 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM0862
|
Burkholderia cenocepacia
J2315 |
New product name: BceI. New product name confidence: Class 2. New PubMed ID: 14637140. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4208.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM0862
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM0862
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM0863
|
Burkholderia cenocepacia
J2315 |
New product name: BceJ. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 22919582. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4209.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM0863
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New GO Accession: GO:0016757(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM0863
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New GO accession: GO:0016757 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM0864
|
Burkholderia cenocepacia
J2315 |
New product name: BceK. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 22919582. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4210.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM0864
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New GO Accession: GO:0016757(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM0864
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New GO accession: GO:0016757 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM0865
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 19948863. New comment: Removed gene name bceL because it was incorrectly assigned in a previous study. Analysis of other Burkholderia genomes including B. phytofirmans and B. xenovorans indicated that the protein was absent from the bce cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM0865
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM0865
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 22, 2009 |
BCAM0918
|
Burkholderia cenocepacia
J2315 |
New gene name: sigE. New product name: sigma factor 70 sigE. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Feb 4, 2013 |
BCAM0925
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0071236(EXP). New PubMed reference: 21781329.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 20, 2020 |
BCAM0925
|
Burkholderia cenocepacia
J2315 |
New product name: RND-8 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-8 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-8; Major RND-8 substrate is tobramycin (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM0926
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0071236(EXP). New PubMed reference: 21781329.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 20, 2020 |
BCAM0926
|
Burkholderia cenocepacia
J2315 |
New product name: RND-8 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-8 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-8; Major RND-8 substrate is tobramycin (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM0927
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0071236(EXP). New PubMed reference: 21781329.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 20, 2020 |
BCAM0927
|
Burkholderia cenocepacia
J2315 |
New product name: RND-8 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-8 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-8; Major RND-8 substrate is tobramycin (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1003
|
Burkholderia cenocepacia
J2315 |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1004
|
Burkholderia cenocepacia
J2315 |
New gene name: bceN. New product name: GDP-D-mannose 4,6-dehydratase BceN. New product name confidence: Class 1. New PubMed ID: 23460819. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1005
|
Burkholderia cenocepacia
J2315 |
New gene name: bceO. New product name: acyltransferase BceO. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4473.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1006
|
Burkholderia cenocepacia
J2315 |
New gene name: bceP. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4474.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1007
|
Burkholderia cenocepacia
J2315 |
New gene name: bceQ. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Disruption of the bceQ and bceR genes, in B. cepacia IST408 (PMID:19948863) resulted in the abolishment of cepacian biosynthesis. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4475.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1008
|
Burkholderia cenocepacia
J2315 |
New gene name: bceR. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Disruption of the bceQ and bceR genes, in B. cepacia IST408 (PMID:19948863) resulted in the abolishment of cepacian biosynthesis. . New comment: Note that another gene (BCAM1493) for a two-component response regulator in B. cenocepacia J2315 was also assigned the name bceR at a later date (PMID:25519693).. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4476.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1009
|
Burkholderia cenocepacia
J2315 |
New gene name: bceS. New product name: acyltransferase BceS. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Note that another gene (BCAM1494) for a two-component sensor kinase in B. cenocepacia J2315 was also assigned the name bceS at a later date (PMID:25519693).. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4477.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1010
|
Burkholderia cenocepacia
J2315 |
New gene name: bceT. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4479.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1011
|
Burkholderia cenocepacia
J2315 |
New gene name: bceU. New product name: acyltransferase BceU. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Since bceU is found in the genome sequences of all Bcc strains as well as in B. thailandensis, B. oklahomensis, and B. pseudomallei strains, the authors of PMID:19948863 considered it to belong as part of bce-II gene cluster.. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4480.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 20, 2020 |
BCAM1115
|
Burkholderia cenocepacia
J2315 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 22, 2009 |
BCAM1259
|
Burkholderia cenocepacia
J2315 |
New gene name: sigJ. New product name: sigma factor 70 SigJ. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Feb 4, 2013 |
BCAM1330
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0044010(IMP). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1331
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IMP). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1332
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IMP). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1333
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1334
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1335
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1336
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1337
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1338
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1339
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1340
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1341
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1349
|
Burkholderia cenocepacia
J2315 |
New product name: CRP/FNR family transcriptional regulator. New product name confidence: Class 1. New GO Accession: GO:1900192(IMP). New GO Accession: GO:2001008(IMP). New GO Accession: GO:0009297(IMP). New PubMed reference: 21883527. New PubMed reference: 23281338.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1493
|
Burkholderia cenocepacia
J2315 |
New gene name: bceR1. New product name: two-component regulatory system response regulator BceR1. New product name confidence: Class 1. New PubMed ID: 25519693. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1494
|
Burkholderia cenocepacia
J2315 |
New gene name: bceS1. New product name: two-component regulatory system sensor kinase BceS1. New product name confidence: Class 1. New PubMed ID: 25519693. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 22, 2009 |
BCAM1661
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfH. New product name: sigma factor 70 EcfH. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Apr 30, 2018 |
BCAM1711
|
Burkholderia cenocepacia
J2315 |
New gene name: paaK2. New product name: Paak2. New product name synonym: phenylacetate-CoA ligase. New product name confidence: Class 1. New PubMed ID: 21388965. New comment:
.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
Jan 25, 2011 |
BCAM1779
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: beta-Lactam resistance. New EC Number: 3.5.2.6. New GO Accession: GO:0008800(ISS). New PubMed reference: 12821450. New PubMed reference: 18931103.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM1779
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: beta-Lactam resistance. New EC Number: 3.5.2.6. New GO accession: GO:0008800 [ISS]. New evidence reference (PMID): 12821450. New evidence reference (PMID): 18931103.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM1857
|
Burkholderia cenocepacia
J2315 |
New gene name: tecA. New product name: type VI secretion system effector protein TecA. New product name confidence: Class 1. New subcellular localization: Extracellular (Class 1). New subcellular localization evidence code (ECO): ECO:0000112. New subcellular localization PMID: 27133449. New PubMed ID: 27133449. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1867
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 16988222.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 10, 2015 |
BCAM1867
|
Burkholderia cenocepacia
J2315 |
New product name: MgtC.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 22, 2009 |
BCAM1867
|
Burkholderia cenocepacia
J2315 |
New gene name: mgtC. New product name confidence: Class 1. New evidence reference (PMID): 16988222.
|
Literature review. Valvano, M. A. University of Western Ontario, London, Ontario
|
Feb 4, 2013 |
BCAM1868
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:1900192(IMP). New GO Accession: GO:0052100(IMP). New GO Accession: GO:0071978(IMP). New PubMed reference: 22950027. New PubMed reference: 11535791.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 22, 2009 |
BCAM1868
|
Burkholderia cenocepacia
J2315 |
New product name: transcriptional regulator CepR. New product name confidence: Class 1. New homology: 99% identity to CepR[B. cepacia K56-2]. New evidence reference (PMID): 11402012.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Feb 4, 2013 |
BCAM1870
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0052100(IMP). New GO Accession: GO:0071978(IMP). New PubMed reference: 11535791.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 10, 2015 |
BCAM1870
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 16041013.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 22, 2009 |
BCAM1870
|
Burkholderia cenocepacia
J2315 |
New product name: acyl-homoserine lactone synthase CepI. New product name confidence: Class 1. New homology: 100% identity to CepI[B. cepacia K56-2] [accession number AF019654]. New evidence reference (PMID): 11402012.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Apr 22, 2009 |
BCAM1870
|
Burkholderia cenocepacia
J2315 |
New homology: 90% identity to CepI[B. vietnamiensis G4]. New evidence reference (PMID): 17277056.
|
Literature review. Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta
|
Feb 4, 2013 |
BCAM1871
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 22624054.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 20, 2020 |
BCAM1945
|
Burkholderia cenocepacia
J2315 |
New product name: RND-9 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-9 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-9; Major RND-9 substrate is tobramycin, chlorhexidine (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 20, 2020 |
BCAM1946
|
Burkholderia cenocepacia
J2315 |
New product name: RND-9 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-9 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-9; Major RND-9 substrate is tobramycin, chlorhexidine (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 20, 2020 |
BCAM1947
|
Burkholderia cenocepacia
J2315 |
New product name: RND-9 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-9 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-9; Major RND-9 substrate is tobramycin, chlorhexidine (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2045
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2045
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2046
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2046
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2047
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2047
|
Burkholderia cenocepacia
J2315 |
New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2048
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2048
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2049
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2049
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2050
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2050
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2051
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2051
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2052
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2052
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2053
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2053
|
Burkholderia cenocepacia
J2315 |
New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2054
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2054
|
Burkholderia cenocepacia
J2315 |
New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2055
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2055
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2056
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2056
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|