Log of Annotation Updates

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Date Locus Tag Strain Description Submitter
Apr 22, 2009 BCAL2872 Burkholderia cenocepacia J2315 New gene name: ecfA2. New product name: EcfA2. New product name confidence: Class 1. New evidence reference (PMID): 17784948. Literature review. Raymond C. Lo, Simon Fraser University
Apr 10, 2015 BCAL2875 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New PubMed ID: 18771721. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL2942 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 16513737. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2942 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IMP]. New evidence reference (PMID): 16513737. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2943 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IGC). New PubMed reference: 16513737. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2943 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IGC]. New evidence reference (PMID): 16513737. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2944 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New pathway: ADP-L-glycero-D-manno-heptose synthesis pathway. New GO Accession: GO:0009244(IGC). New PubMed reference: 16513737. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 10, 2015 BCAL2944 Burkholderia cenocepacia J2315 New product name confidence: Class 1. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL2944 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New pathway: ADP-L-glycero-D-manno-heptose synthesis pathway. New GO accession: GO:0009244 [IGC]. New evidence reference (PMID): 16513737. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2945 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New pathway: ADP-L-glycero-D-manno-heptose synthesis pathway. New GO Accession: GO:0009244(IMP). New PubMed reference: 16513737. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2945 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New pathway: ADP-L-glycero-D-manno-heptose synthesis pathway. New GO accession: GO:0009244 [IMP]. New evidence reference (PMID): 16513737. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAL2945  Burkholderia cenocepacia J2315 New PubMed reference: 23256532. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2946 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New EC Number: 1.1.1.22. New GO Accession: GO:0009244(IMP). New GO Accession: GO:0003979(IMP). New PubMed reference: 16513737. New PubMed reference: 19383677. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2946 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New EC Number: 1.1.1.22. New GO accession: GO:0009244 [IMP]. New GO accession: GO:0003979 [IMP]. New evidence reference (PMID): 16513737. New evidence reference (PMID): 19383677. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2947 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(ISS). New PubMed reference: 16513737. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2947 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [ISS]. New evidence reference (PMID): 16513737. New genomic context: hld gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3110 Burkholderia cenocepacia J2315 New product name: WaaA. New product name confidence: Class 2. New PubMed ID: 28085228. New comment: .Annotation transferred from: UniProtKB:P0AC75. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3110 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3110 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3110 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3110 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IMP]. New evidence reference (PMID): 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3111 Burkholderia cenocepacia J2315 New gene name: kdoO. New product name: Kdo 3-hydroxylase KdoO. New product name confidence: Class 2. New PubMed ID: 28085228. New PubMed ID: 21178073. New PubMed ID: 25204504. New comment: Responsible for Ko formation with Kdo2-lipid A as a substrate.Annotation transferred from: UniProtKB:E9NYT3. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3111 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3111 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3112 Burkholderia cenocepacia J2315 New product name: heptosyltransferase I WaaC. New PubMed ID: 19525227. New comment: Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3112 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3112 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3112 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3112 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IMP]. New evidence reference (PMID): 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3113 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3113 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3114 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3114 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3114 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3115 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3115 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3115 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3116 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3116 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3116 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3117 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3117 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IMP). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3117 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IMP]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3118 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3118 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3118 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3119 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3119 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3119 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 22, 2009 BCAL3119 Burkholderia cenocepacia J2315 New product name: WbiI. New product name confidence: Class 2. New homology: 67.8% identity to whpM[P. aeruginosa PAO1]. New homology: 99% identity to WbiI[accession number AY523838]. New evidence reference (PMID): 15364998. Literature review. Raymond C. Lo, Simon Fraser University
Apr 30, 2018 BCAL3120 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3120 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3120 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3121 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New PubMed ID: 26116716. New comment: Belongs to the O antigen biosynthesis gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3121 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3121 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3122 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3122 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3122 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3123 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3123 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3123 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3124 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3124 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3124 Burkholderia cenocepacia J2315 New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3125 New product name: pseudogene (WbxB). New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster. New comment: B cenocepacia J2315, but not K56-2, is O-antigen deficient due to a transposon insertion in this gene. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3125 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3125 New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3126b Burkholderia cenocepacia J2315 New comment : Contains IS402 insertion sequence responsible for disrupting O-antigen production by O-antigen gene cluster.. New PubMed reference: 15687196. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3126b Burkholderia cenocepacia J2315 New evidence reference (PMID): 15687196. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3128 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAL3129 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAL3130 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAL3131 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAL3132 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 21640586. New comment: .Annotation transferred from: BGD:BTH_I1472. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAL3133 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 21640586. New comment: .Annotation transferred from: BGD:BTH_I1471. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAL3134 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 21640586. New comment: .Annotation transferred from: BD:BTH_I1470. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAL3135 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 21640586. New comment: .Annotation transferred from: BGD:BTH_I1469. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 22, 2009 BCAL3151 Burkholderia cenocepacia J2315 New gene name: ecfF. New product name: sigma factor 70 EcfF. New product name confidence: Class 2. New evidence reference (PMID): 17784948. Literature review. Raymond C. Lo, Simon Fraser University
Apr 10, 2015 BCAL3240 Burkholderia cenocepacia J2315 New product name: capsule polysaccharide export ATP-binding protein, CpxA. New gene name synonym: cpxA. New product name confidence: Class 2. New PubMed ID: 15213146. Annotation transferred from: Refseq:NP_283042.1. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAL3310 Burkholderia cenocepacia J2315 New gene name: bcnB. New product name: BcnB. New product name confidence: Class 1. New PubMed ID: 28292982. New comment: Miguel Valvano, Queen's University of Belfast
Apr 30, 2018 BCAL3311 Burkholderia cenocepacia J2315 New gene name: bcnA. New product name: BcnA. New product name confidence: Class 1. New subcellular localization: Extracellular (Class 1). New subcellular localization evidence code (ECO): ECO:0000279. New subcellular localization PMID: 28292982. New PubMed ID: 28292982. New comment: Miguel Valvano, Queen's University of Belfast
Apr 22, 2009 BCAL3378 Burkholderia cenocepacia J2315 New product name: ferric uptake regulator Fur. New product name confidence: Class 2. New evidence reference (PMID): 18057135. Literature review. Dennis, J. J. Department of Biological Sciences, University of Alberta, Edmonton, Alberta.
Feb 4, 2013 BCAL3426 Burkholderia cenocepacia J2315 New product name: SlyB. New gene name: slyB. New product name confidence: Class 2. New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 2. New PubMed reference: 16500084. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL3455 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15610978. New comment: .Annotation transferred from: UniProtKB:P0A725. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 22, 2009 BCAL3478 Burkholderia cenocepacia J2315 New gene name: ecfB. New product name: sigma factor 70 EcfB. New product name confidence: Class 1. New evidence reference (PMID): 17784948. Literature review. Raymond C. Lo, Simon Fraser University
Apr 22, 2009 BCAL3486 Burkholderia cenocepacia J2315 New gene name: ecfM. New product name: sigma factor 70 EcfM. New product name confidence: Class 1. New evidence reference (PMID): 17784948. Literature review. Raymond C. Lo, Simon Fraser University
Jan 25, 2011 BCAL3515 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(ISS). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3515 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [ISS]. New evidence reference (PMID): 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3516 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3516 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3517 New comment : Contains frameshift mutation.. New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3517 New evidence reference (PMID): 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3519 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3519 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3520 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3520 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3521 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3521 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3522 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
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