| Apr 30, 2018 |
BURCENK562V_RS28550
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: paaG. New product name: PaaG. New product name synonym: putative 1,2-epoxyphenylacetyl-CoA isomerase/ 3,4-dehydroadipyl-CoA isomerase. New product name confidence: Class 2. New PubMed ID: 12846838. New comment:
. Annotation transferred from: UniProtKB:P77467.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
BURCENK562V_RS28555
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: paaJ. New product name: PaaJ. New product name synonym: putative beta-ketothiolase (3-oxo-5,6-dehydrosuberyl-CoA thiolase). New product name confidence: Class 2. New PubMed ID: 12846838. New comment:
. Annotation transferred from: UniProtKB:P0C7L2.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
BURCENK562V_RS28560
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: pacL. New product name: PacL. New product name synonym: putative 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. New product name confidence: Class 2. New PubMed ID: 21296885. New PubMed ID: 18776009. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P3J4.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
BURCENK562V_RS29050
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: rmlB. New product name confidence: Class 2. New PubMed ID: 21640586. New comment: .Annotation transferred from: BGD:BTH_I1469.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29055
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: rmlA. New product name confidence: Class 2. New PubMed ID: 21640586. New comment: .Annotation transferred from: BGD::BTH_I1470.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29060
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: rmlC. New product name confidence: Class 2. New PubMed ID: 21640586. New comment: .Annotation transferred from: BGD:BGD:BTH_I1471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29065
|
Burkholderia cenocepacia
K56-2Valvano |
New PubMed ID: 21640586. New comment: .Annotation transferred from: BGD:BGD:BTH_I1472.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29070
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wzm. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3131.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29075
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wzt. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3130.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29080
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: vioA. New product name: nucleotide sugar aminotransferase VioA. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3129.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29085
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbxF. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3128.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29090
|
Burkholderia cenocepacia
K56-2Valvano |
New product name: WbxE. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster. New comment: B cenocepacia J2315, but not K56-2, is O-antigen deficient due to a transposon insertion in this gene..Annotation transferred from: BGD:BCAL3125.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURCENK562V_RS29090
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbxE. New product name confidence: Class 2. New PubMed ID: 16513737.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29095
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbxD. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3124.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29100
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbxC. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3123.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29105
|
Burkholderia cenocepacia
K56-2Valvano |
New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3122.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29110
|
Burkholderia cenocepacia
K56-2Valvano |
New product name confidence: Class 1. New PubMed ID: 26116716. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3121.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29115
|
Burkholderia cenocepacia
K56-2Valvano |
New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3120.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29120
|
Burkholderia cenocepacia
K56-2Valvano |
New product name confidence: Class 1. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3119.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29125
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wecA. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3118.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29130
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: galE. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3117.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29135
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbxB. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3116.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29140
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbxA. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3115.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29145
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wzx. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3114.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29160
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: kdoO. New product name: Kdo 3-hydroxylase KdoO. New gene name synonym: wbxY. New product name confidence: Class 2. New PubMed ID: 28085228. New PubMed ID: 21178073. New PubMed ID: 25204504. New comment: Responsible for Ko formation with Kdo2-lipid A as a substrate.Annotation transferred from: UniProtKB:E9NYT3.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURCENK562V_RS3
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: hldA. New product name confidence: Class 1. New PubMed ID: 16513737.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURCENK562V_RS3
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: hldD. New product name confidence: Class 1. New PubMed ID: 16513737.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURCENK562V_RS3
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: rpoE. New product name confidence: Class 1. New PubMed ID: 18227267.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURCENK562V_RS3
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 1. New PubMed ID: 15557647.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURCENK562V_RS3
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: shvR. New product name: ShvR. New product name confidence: Class 1. New PubMed ID: 17967860.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURCENK562V_RS3
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: zmpA. New product name: zinc metalloprotease ZmpA. New product name confidence: Class 1. New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0000279 .New subcellular localization PMID: 12904566 .New PubMed ID: 12904566.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS32320
|
Burkholderia cenocepacia
K56-2Valvano |
New product name: putative (R)-specific oxepin-CoA hydratase. New product name synonym: PaaZ-ECH. New product name confidence: Class 2. New PubMed ID: 21296885. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P232.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
BURCENK562V_RS34640
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwG. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS34645
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwH. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS34665
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwF. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS34680
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwN. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS34695
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: pwbC. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS34700
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwU. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS34705
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwW. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS34755
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwC. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS34760
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwV. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS34770
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwB. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS34775
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwK. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS34780
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwE. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS34785
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwL. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS34830
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwC. New gene name synonym: trwC. New product name confidence: Class 2. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster. .Annotation transferred from: UniProtKB:Q8PRK1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS34840
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: ptwD4. New product name: type IV secretion system-coupling protein ptwD4. New gene name synonym: trwB. New product name confidence: Class 2. New PubMed ID: 27200362. New PubMed ID: 15342570. New PubMed ID: 19744991. New PubMed ID: 18824538. New comment: This gene is part of the B. cenocepacia K56-2 plasmid-encoded ptw type IV secretion cluster. .Annotation transferred from: UniProtKB:P09130.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0007
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0007
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0008
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0008
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0009
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0009
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0010
|
Burkholderia pseudomallei
1106a |
New product name confidence: Class 1. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IMP]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0010
|
Burkholderia pseudomallei
1106a |
New product name confidence: Class 1. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IMP). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0012
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0012
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0013
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0013
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0014
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0014
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0015
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0015
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0016
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0016
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0017
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0017
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0018
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IGC]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0018
|
Burkholderia pseudomallei
1106a |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0019
|
Burkholderia pseudomallei
1106a |
New product name confidence: Class 1. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO accession: GO:0015628 [IMP]. New evidence reference (PMID): 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0019
|
Burkholderia pseudomallei
1106a |
New product name confidence: Class 1. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IMP). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_3356
|
Burkholderia pseudomallei
1106a |
New product name confidence: Class 1. New EC Number: 1.11.1.6;1.11.1.7. New GO Accession: GO:0004096(IDA). New GO Accession: GO:0004601(IDA). New PubMed reference: 12832453.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_3356
|
Burkholderia pseudomallei
1106a |
New product name confidence: Class 1. New EC Number: 1.11.1.6;1.11.1.7. New GO accession: GO:0004096 [IDA]. New GO accession: GO:0004601 [IDA]. New evidence reference (PMID): 12832453.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A109
|
Burkholderia pseudomallei
1106a |
New gene name: boaA. New product name: Burkholderia oligomeric coiled-coil adhesin A, BoaA. New product name confidence: Class 2. New PubMed ID: 20920184. Annotation transferred from: Locus Tag:BPSS0796.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A202
|
Burkholderia pseudomallei
1106a |
New product name: Burkholderia intracellular motility A, BimA. New product name confidence: Class 2. New PubMed ID: 15773977. Annotation transferred from: Locus Tag:BPSS1492.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A205
|
Burkholderia pseudomallei
1106a |
New gene name: bprC. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1520.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A205
|
Burkholderia pseudomallei
1106a |
New gene name: bopC. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1516.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A206
|
Burkholderia pseudomallei
1106a |
New gene name: bprD. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1521.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A206
|
Burkholderia pseudomallei
1106a |
New gene name: bprB. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1522.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A206
|
Burkholderia pseudomallei
1106a |
New gene name: bopE. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1525.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A206
|
Burkholderia pseudomallei
1106a |
New gene name: bopA. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1524.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A206
|
Burkholderia pseudomallei
1106a |
New gene name: bicP. New product name: Chaperone protein BicP. New gene name synonym: sicP. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 21801239. Annotation transferred from: UniProtKB:P0CL16.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A207
|
Burkholderia pseudomallei
1106a |
New gene name: bprA. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1530.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A207
|
Burkholderia pseudomallei
1106a |
New gene name: bipD. New gene name synonym: ipaD. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18013.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A207
|
Burkholderia pseudomallei
1106a |
New gene name: bipC. New product name confidence: Class 2. New PubMed ID: 20951592.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A207
|
Burkholderia pseudomallei
1106a |
New gene name synonym: ipaB. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18011.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A207
|
Burkholderia pseudomallei
1106a |
New gene name: bicA. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 11296219. Annotation transferred from: Locus Tag:BPSS1533.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A207
|
Burkholderia pseudomallei
1106a |
New gene name: bsaW. New product name: BsaW. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1537.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A207
|
Burkholderia pseudomallei
1106a |
New gene name: bsaZ. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1534.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A207
|
Burkholderia pseudomallei
1106a |
New gene name: bsaY. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1535.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A207
|
Burkholderia pseudomallei
1106a |
New gene name: bsaX. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1536.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A208
|
Burkholderia pseudomallei
1106a |
New gene name: bsaV. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1538.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A208
|
Burkholderia pseudomallei
1106a |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A208
|
Burkholderia pseudomallei
1106a |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1540.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A208
|
Burkholderia pseudomallei
1106a |
New gene name: bsaS. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1541.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A208
|
Burkholderia pseudomallei
1106a |
New gene name: bsaR. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1542.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A208
|
Burkholderia pseudomallei
1106a |
New gene name: bsaQ. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1543.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A208
|
Burkholderia pseudomallei
1106a |
New gene name: bsaP. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1544.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A208
|
Burkholderia pseudomallei
1106a |
New gene name: bsaO. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1545.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A208
|
Burkholderia pseudomallei
1106a |
New gene name: bsaN. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1546.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|