Log of Annotation Updates

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Date Locus Tag Strain Description Submitter
Jan 25, 2011 BTH_I2961 Burkholderia thailandensis E264 ATCC 700388 New product name: TssE-1. New gene name: tssE-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0137 Burkholderia thailandensis E264 ATCC 700388 New product name: TssE-2. New gene name: tssE-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1898 Burkholderia thailandensis E264 ATCC 700388 New product name: TssE-4. New gene name: tssE-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0867 Burkholderia thailandensis E264 ATCC 700388 New product name: TssE-5. New gene name: tssE-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_I2960 Burkholderia thailandensis E264 ATCC 700388 New product name: TssF-1. New gene name: tssF-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0136 Burkholderia thailandensis E264 ATCC 700388 New product name: TssF-2. New gene name: tssF-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1897 Burkholderia thailandensis E264 ATCC 700388 New product name: TssF-4. New gene name: tssF-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0866 Burkholderia thailandensis E264 ATCC 700388 New product name: TssF-5. New gene name: tssF-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_I2959 Burkholderia thailandensis E264 ATCC 700388 New product name: TssG-1. New gene name: tssG-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0135 Burkholderia thailandensis E264 ATCC 700388 New product name: TssG-2. New gene name: tssG-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1896 Burkholderia thailandensis E264 ATCC 700388 New product name: TssG-4. New gene name: tssG-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0865 Burkholderia thailandensis E264 ATCC 700388 New product name: TssG-5. New gene name: tssG-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_I2966 Burkholderia thailandensis E264 ATCC 700388 New product name: TssJ-1. New gene name: tssJ-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0124 Burkholderia thailandensis E264 ATCC 700388 New product name: TssJ-2. New gene name: tssJ-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1888 Burkholderia thailandensis E264 ATCC 700388 New product name: TssJ-4. New gene name: tssJ-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0858 Burkholderia thailandensis E264 ATCC 700388 New product name: TssJ-5. New gene name: tssJ-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_I2967 Burkholderia thailandensis E264 ATCC 700388 New product name: TssK-1. New gene name: tssK-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0125 Burkholderia thailandensis E264 ATCC 700388 New product name: TssK-2. New gene name: tssK-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1887 Burkholderia thailandensis E264 ATCC 700388 New product name: TssK-4. New gene name: tssK-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0857 Burkholderia thailandensis E264 ATCC 700388 New product name: Tssk-5. New gene name: tssk-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_I2968 Burkholderia thailandensis E264 ATCC 700388 New product name: TssL-1. New gene name: tssL-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0119 Burkholderia thailandensis E264 ATCC 700388 New product name: TssL-2a. New gene name: tssL-2a. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0126 Burkholderia thailandensis E264 ATCC 700388 New product name: TssL-2b. New gene name: tssL-2b. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1886 Burkholderia thailandensis E264 ATCC 700388 New product name: TssL-4. New gene name: tssL-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0856 Burkholderia thailandensis E264 ATCC 700388 New product name: TssL-5. New gene name: tssL-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_I2954 Burkholderia thailandensis E264 ATCC 700388 New product name: TssM-1. New gene name: tssM-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0127 Burkholderia thailandensis E264 ATCC 700388 New product name: TssM-2. New gene name: tssM-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1885 Burkholderia thailandensis E264 ATCC 700388 New product name: TssM-4. New gene name: tssM-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0855 Burkholderia thailandensis E264 ATCC 700388 New product name: TssM-5. New gene name: tssM-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0129 Burkholderia thailandensis E264 ATCC 700388 New product name: VgrG-2. New gene name: vgrG-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1894 Burkholderia thailandensis E264 ATCC 700388 New product name: VgrG-4a. New gene name: vgrG-4a. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1893 Burkholderia thailandensis E264 ATCC 700388 New product name: VgrG-4b. New gene name: vgrG-4b. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 20, 2020 WQ49_RS20305 Burkholderia cenocepacia K56-2 New product name: vitronectin-binding trimeric autotransporter adhesin. New product name confidence: Class 1. New comment: A BCAM0223::Tp mutant was deficient in hemagglutination, affected in adherence to vitronectin and in biofilm formation and showed attenuated virulence in the Galleria mellonella model of infection. . New PMIDs: 22919579, 22848588, 20019083. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL2405 Burkholderia cenocepacia J2315 New product name: waaL. New gene name: waaL. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2402 Burkholderia cenocepacia J2315 New product name: WabO. New gene name: wabO. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2403 Burkholderia cenocepacia J2315 New product name: WabP. New gene name: wabP. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2404 Burkholderia cenocepacia J2315 New product name: wabQ. New gene name: wabQ. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2406 Burkholderia cenocepacia J2315 New product name: wabR. New gene name: wabR. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL2407 Burkholderia cenocepacia J2315 New product name: WabS. New gene name: wabS. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2047 Burkholderia cenocepacia J2315 New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2053 Burkholderia cenocepacia J2315 New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2054 Burkholderia cenocepacia J2315 New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2058 Burkholderia cenocepacia J2315 New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2059 Burkholderia cenocepacia J2315 New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1867 Burkholderia cenocepacia J2315 New PubMed reference: 16988222. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1871 Burkholderia cenocepacia J2315 New PubMed reference: 22624054. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM0379 Burkholderia cenocepacia J2315 New PubMed reference: 22830644. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM0219 Burkholderia cenocepacia J2315 New PubMed reference: 22848588. New genomic context: TAA gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM0218 Burkholderia cenocepacia J2315 New PubMed reference: 22848588. New genomic context: TAA gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM0227 Burkholderia cenocepacia J2315 New PubMed reference: 22848588. New genomic context: TAA gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM0221 Burkholderia cenocepacia J2315 New PubMed reference: 22848588. New genomic context: TAA gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM0222 Burkholderia cenocepacia J2315 New PubMed reference: 22848588. New genomic context: TAA gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM0228 Burkholderia cenocepacia J2315 New PubMed reference: 22848588. New genomic context: TAA gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAL2945  Burkholderia cenocepacia J2315 New PubMed reference: 23256532. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAS0409 Burkholderia cenocepacia J2315 New subcellular localization: Extracellular. New subcellular localization confidence: Class 1. New GO Accession: GO:0008237(IMP). New GO Accession: GO:0015628(IMP). New PubMed reference: 22848580. New PubMed reference: 12904566. New PubMed reference: 2645209. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM2549 Burkholderia cenocepacia J2315 New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 1. New PubMed reference: 8834871. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Aug 1, 2008 Bcep18194_A4778 New alternate gene name: orbS. New alternate product name: putative RNA polymerase sigma factor, OrbS. New homology: 94% identity to OrbS[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bamb_1529 New alternate gene name: orbS. New alternate product name: putative RNA polymerase sigma factor, OrbS. New homology: 96% identity to OrbS[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bcen2424_1632 New alternate gene name: orbS. New alternate product name: putative RNA polymerase sigma factor, OrbS. New homology: 98% identity to OrbS[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Aug 1, 2008 Bcen_1152 New alternate gene name: orbS. New alternate product name: putative RNA polymerase sigma factor, OrbS. New homology: 98% identity to OrbS[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617. Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
Apr 30, 2018 BTH_RS10711 Burkholderia thailandensis E264 ATCC 700388 New CDS gene identified at 2571843..2572394 (+ strand). New start coordinate: 2571843. New end coordinate: 2572394. New gene name: malH. New product name: MalH. New PubMed ID: 22765305. New comment: Part of the malleilactone biosynthetic gene cluster.. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1546 Burkholderia pseudomallei K96243 New end coordinate: 2101323. New product name: regulator of type III secretion system effector proteins BsaN (T3SS-3). New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 25085508. New PubMed ID: 20345664. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus. The original start codon (GTG) was replaced with an ATG that was 117 bp upstream of it (PMID:25085508). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BMAA0729 New end coordinate: 738159. New gene name: tssM. New product name confidence: Class 1. New PubMed ID: 19168747. New comment: New translation start site at 738159 bp was confirmed by immunoblot analysis and complementation studies (PMID: 19168747 ). New genomic context: T6SS-1 gene cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAL3517 New evidence reference (PMID): 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2047 Burkholderia cenocepacia J2315 New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2053 Burkholderia cenocepacia J2315 New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2054 Burkholderia cenocepacia J2315 New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2058 Burkholderia cenocepacia J2315 New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2059 Burkholderia cenocepacia J2315 New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3126b Burkholderia cenocepacia J2315 New evidence reference (PMID): 15687196. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAL0352 Burkholderia cenocepacia J2315 New gene name synonym: bcsA. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 21178498. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 I35_RS01775 Burkholderia cenocepacia H111 New gene name synonym: bcsA. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 21178498. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BURCENK562V_RS28290 Burkholderia cenocepacia K56-2Valvano New gene name synonym: bcsA. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 21178498. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAL0340 Burkholderia cenocepacia J2315 New gene name synonym: bcsM. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 I35_RS01715 Burkholderia cenocepacia H111 New gene name synonym: bcsM. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BURCENK562V_RS28230 Burkholderia cenocepacia K56-2Valvano New gene name synonym: bcsM. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1532 Burkholderia pseudomallei K96243 New gene name synonym: ipaB. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18011. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BURPS1710b_A057 Burkholderia pseudomallei 1710b New gene name synonym: ipaB. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18011. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BURPS1106A_A207 Burkholderia pseudomallei 1106a New gene name synonym: ipaB. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18011. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BMA10247_A0753 Burkholderia mallei NCTC 10247 New gene name synonym: ipaB. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18011. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BMA10229_2073 Burkholderia mallei NCTC 10229 New gene name synonym: ipaB. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18011. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BMAA1531 New gene name synonym: ipaB. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18011. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1529 Burkholderia pseudomallei K96243 New gene name synonym: ipaD. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 20823511. New PubMed ID: 12410823. Annotation transferred from: UniProtKB:P18013. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BCAM2630 Burkholderia cenocepacia J2315 New gene name synonym: phuV. New product name confidence: Class 2. New PubMed ID: 17187664. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAM0581 Burkholderia cenocepacia J2315 New gene name synonym: rpfF. New PubMed ID: 18049456. New PubMed ID: 23231487. New PubMed ID: 25681189. New PubMed ID: 26725701. New PubMed ID: 22221091. New comment: Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Sep 15, 2008 Bamb_6150 New gene name: afcA. New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 86% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823. Literature review. Based on article by Schell, M. A. University of Georgia, Athens, Georgia.
Sep 15, 2008 Bcep18194_C7411 New gene name: afcA. New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 89% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823. Literature review. Based on article by Schell, M. A. University of Georgia, Athens, Georgia.
Sep 15, 2008 Bcen_5637 New gene name: afcA. New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 95% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823. Literature review. Schell, M. A. University of Georgia, Athens, Georgia
Sep 15, 2008 Bcen_5637 New gene name: afcA. New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 95% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823. Literature review. Schell, M. A. University of Georgia, Athens, Georgia
Sep 15, 2008 Bcen2424_6002 New gene name: afcA. New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 95% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823. Literature review. Based on article by Schell, M. A. University of Georgia, Athens, Georgia.
Sep 15, 2008 Bcenmc03_6493 Burkholderia cenocepacia MC0-3 New gene name: afcA. New product name: putative amino acid activating protein. New product name confidence: Class 1. New homology: 95% identity to AfcA [B.cepacia BC11]. New evidence reference (PMID): 9758823. Literature review. Based on article by Schell, M. A. University of Georgia, Athens, Georgia.
Jan 14, 2010 BCAS0223 Burkholderia cenocepacia J2315 New gene name: afcC. New product name: AfcC. New product name confidence: Class 2. New evidence reference (PMID): 9758823. Eoin O'Grady, Department of Microbiology and Infectious Diseases, University of Calgary, Canada
Apr 10, 2015 BURCENK562V_RS3 Burkholderia cenocepacia K56-2Valvano New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 1. New PubMed ID: 15557647. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Aug 25, 2008 Bcenmc03_6383 Burkholderia cenocepacia MC0-3 New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 2. New homology: 55% identity to AidA [Ralstonia solanacearum UW551]. New evidence reference (PMID): 15557647. Literature Review. Eberl, Leo. University Zurich, Zurich, Switzerland
Aug 25, 2008 Bcen2424_5874 New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 2. New homology: 55% identity to AidA [Ralstonia solanacearum UW551]. New evidence reference (PMID): 15557647. Literature Review. Eberl, Leo. University Zurich, Zurich, Switzerland
Aug 25, 2008 Bcen_5510 New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 2. New homology: 55% identity to AidA [Ralstonia solanacearum UW551]. New evidence reference (PMID): 15557647. Literature Review. Eberl, Leo. University Zurich, Zurich, Switzerland
Aug 25, 2008 Bcep18194_C7212 New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 2. New homology: 55% identity to AidA [Ralstonia solanacearum UW551]. New evidence reference (PMID): 15557647. Literature Review. Eberl, Leo. University Zurich, Zurich, Switzerland
Aug 25, 2008 Bamb_0841 New gene name: alkB. New product name: alkane hydroxylase AlkB. New product name confidence: Class 2. New homology: 86% identity to AlkB [B. cepacia RR10]. New evidence reference (PMID): 11418560. Literature Review. Rojom, Fernando. Centro Nacional de Biotecnologia, Madrid, Spain
Aug 25, 2008 Bcen2424_0980 New gene name: alkB. New product name: alkane hydroxylase AlkB. New product name confidence: Class 2. New homology: 89% identity to AlkB [B. cepacia RR10]. New evidence reference (PMID): 11418560. Literature Review. Rojom, Fernando. Centro Nacional de Biotecnologia, Madrid, Spain
Aug 25, 2008 Bcen_0501 New gene name: alkB. New product name: alkane hydroxylase AlkB. New product name confidence: Class 2. New homology: 89% identity to AlkB [B. cepacia RR10]. New evidence reference (PMID): 11418560. Literature Review. Rojom, Fernando. Centro Nacional de Biotecnologia, Madrid, Spain
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