| Apr 20, 2020 |
BCAM2449
|
Burkholderia cenocepacia
J2315 |
New product name synonym: RND-10 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of ceoAB-opcM (rnd-10) operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump (RND-10); Major substrates of RND-10 are chloramphenicol, flouroquinolones and trimethoprim. New PMIDs: 14755343, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2550
|
Burkholderia cenocepacia
J2315 |
New product name synonym: RND-10 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of ceoAB-opcM (rnd-10) operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump (RND-10); Major substrates of RND-10 are chloramphenicol, flouroquinolones and trimethoprim. New PMIDs: 14755343, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAS0208
|
Burkholderia cenocepacia
J2315 |
New product name: AfcE. New gene name: afcE. New product name confidence: Class 1. New GO Accession: GO:0071978(IMP). New GO Accession: GO:0044010(IMP). New GO Accession: GO:0006629(IMP). New PubMed reference: 23306671. New PubMed reference: 21690240.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAS0201
|
Burkholderia cenocepacia
J2315 |
New product name: AfcF. New gene name: afcF. New product name confidence: Class 1. New GO Accession: GO:0071978(IMP). New GO Accession: GO:0044010(IMP). New GO Accession: GO:0006629(IMP). New PubMed reference: 23306671. New PubMed reference: 21690240.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM2143
|
Burkholderia cenocepacia
J2315 |
New product name: BapA. New gene name: bapA. New product name confidence: Class 1. New synonym for gene: adhA. New synonym for CDS: AdhA. New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 1. New GO Accession: GO:0044010(IMP). New PubMed reference: 23185499. New PubMed reference: 16313619. New PubMed reference: 22950027.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM0184
|
Burkholderia cenocepacia
J2315 |
New product name: BclB. New gene name: bclB. New product name confidence: Class 1. New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 1. New GO Accession: GO:0044010(IMP). New PubMed reference: 22950027. New genomic context: bclACB operon.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL0342
|
Burkholderia cenocepacia
J2315 |
New product name: BcsK. New gene name: bcsK. New product name confidence: Class 1. New synonym for gene: bcsKC. New synonym for CDS: BcsKC. 0 New GO Accession: GO:0033103(IMP). New PubMed reference: 20729192. New subcellular localization: Outer Membrane (Class 1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL0343
|
Burkholderia cenocepacia
J2315 |
New product name: BcsL. New gene name: bcsL. New synonym for gene: bcsLB. New synonym for CDS: BcsLB. New GO Accession: GO:0033103(IGC). New PubMed reference: 20729192.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM0581
|
Burkholderia cenocepacia
J2315 |
New product name: bifunctional crotonase homologue. New product name confidence: Class 1. New GO Accession: GO:0016297(IDA). New GO Accession: GO:0016836(IDA). New PubMed reference: 22949660. New PubMed reference: 18049456. New PubMed reference: 22221091.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS1517
|
Burkholderia pseudomallei
K96243 |
New product name: BopB. New gene name: bopB. New product name confidence: Class 2. New GO Accession: GO:0030254(IDA). New PubMed reference: 16164564.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS1516
|
Burkholderia pseudomallei
K96243 |
New product name: BopC. New gene name: bopC. New product name confidence: Class 1. New subcellular localization: Extracellular. New subcellular localization confidence: Class 1. New GO Accession: GO:0030254(IDA). New PubMed reference: 22092682.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM0188
|
Burkholderia cenocepacia
J2315 |
New product name: CepR2. New gene name: cepR2. New comment : CepR2 functions as an antiactivator of CepS.. New GO Accession: GO:0052100(IMP). New GO Accession: GO:1900706(IMP). New GO Accession: GO:0043433(IMP). New PubMed reference: 23136852.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM0189
|
Burkholderia cenocepacia
J2315 |
New product name: CepS. New gene name: cepS. New GO Accession: GO:0045893(IMP). New PubMed reference: 23136852.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM0580
|
Burkholderia cenocepacia
J2315 |
New product name: Cis-2-dodecenoic acid receptor RpfR. New gene name: rpfR. New product name confidence: Class 1. New GO Accession: GO:0071111(IMP). New PubMed reference: 22949660.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 20, 2020 |
BP1026B_II1037
|
Burkholderia pseudomallei
1026b |
New product name: class A beta-lactamase, PenA. New product name confidence: Class 1. New comment: B. multivorans PenA is an inhibitor-resistant carbapenemase, whereas the B. pseudomallei PenA is an extended spectrum beta-lactamase (PMID:27620956). New PMID: 1718214.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2958
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: clpV-1. New gene name: clpV-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0140
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: ClpV-2. New gene name: clpV-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1895
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: ClpV-4. New gene name: clpV-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0864
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: ClpV-5. New gene name: clpV-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM0224
|
Burkholderia cenocepacia
J2315 |
New product name: collagen-binding trimeric autotransporter adhesin. New GO Accession: GO:0007160(IMP). New PubMed reference: 22848588. New PubMed reference: 20019083. New genomic context: TAA gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM1349
|
Burkholderia cenocepacia
J2315 |
New product name: CRP/FNR family transcriptional regulator. New product name confidence: Class 1. New GO Accession: GO:1900192(IMP). New GO Accession: GO:2001008(IMP). New GO Accession: GO:0009297(IMP). New PubMed reference: 21883527. New PubMed reference: 23281338.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2409
|
Burkholderia cenocepacia
J2315 |
New product name: DnaE. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IGC). New PubMed reference: 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2248
|
Burkholderia cenocepacia
J2315 |
New product name: Group I Sfp-type phosphopantetheinyl transferase, PobA. New gene name: pobA. New product name confidence: Class 1. New pathway: pyochelin and ornibactin biosynthesis. New GO Accession: GO:0033212(IMP). New PubMed reference: 20966087.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2962
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: hcp-1. New gene name: hcp-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0123
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: Hcp-2. New gene name: hcp-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1899
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: Hcp-4. New gene name: hcp-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0868
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: Hcp-5. New gene name: hcp-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL1879
|
Burkholderia cenocepacia
J2315 |
New product name: Hfq. New product name confidence: Class 1. New GO Accession: GO:0006979(IPI). New GO Accession: GO:0003723(EXP). New PubMed reference: 21278292. New PubMed reference: 19942656. New PubMed reference: 23142676.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL1538
|
Burkholderia cenocepacia
J2315 |
New product name: Hfq2. New gene name: hfq2. New product name confidence: Class 1. New GO Accession: GO:0006979(IPI). New GO Accession: GO:0003723(EXP). New GO Accession: GO:0003677(). New PubMed reference: 21278292. New PubMed reference: 19942656. New PubMed reference: 23142676.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS0481
|
Burkholderia pseudomallei
K96243 |
New product name: HhqA. New gene name: hhqA. New pathway: 2-heptyl-4(1H)-quinolone biosynthesis. New PubMed reference: 16873018.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS0482
|
Burkholderia pseudomallei
K96243 |
New product name: HhqB. New gene name: hhqB. New pathway: 2-heptyl-4(1H)-quinolone biosynthesis. New PubMed reference: 16873018.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS0483
|
Burkholderia pseudomallei
K96243 |
New product name: HhqC. New gene name: hhqC. New pathway: 2-heptyl-4(1H)-quinolone biosynthesis. New PubMed reference: 16873018.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS0484
|
Burkholderia pseudomallei
K96243 |
New product name: HhqD. New gene name: hhqD. New pathway: 2-heptyl-4(1H)-quinolone biosynthesis. New PubMed reference: 16873018.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS0485
|
Burkholderia pseudomallei
K96243 |
New product name: HhqE. New gene name: hhqE. New pathway: 2-heptyl-4(1H)-quinolone biosynthesis. New PubMed reference: 16873018.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM2552
|
Burkholderia cenocepacia
J2315 |
New product name: LlpE. New product name confidence: Class 3. New PubMed reference: 15837391.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2408
|
Burkholderia cenocepacia
J2315 |
New product name: MsbA. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IGC). New PubMed reference: 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
bglu_1g00500
|
Burkholderia glumae
BGR1 |
New product name: PidR. New gene name: pidR. New product name confidence: Class 1. New PubMed reference: 22364153.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
bglu_1g00490
|
Burkholderia glumae
BGR1 |
New product name: PidS. New gene name: pidS. New product name confidence: Class 1. New PubMed reference: 22364153.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS1523
|
Burkholderia pseudomallei
K96243 |
New product name: putative Type III secretion system chaperone protein. New product name confidence: Class 2. New GO Accession: GO:0030254(IDA). New PubMed reference: 16164564.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS1524
|
Burkholderia pseudomallei
K96243 |
New product name: putative Type III secretion system effector protein. New product name confidence: Class 2. New GO Accession: GO:0030254(IDA). New PubMed reference: 16164564.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0131
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: Rhs-2. New gene name: rhs-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0591
|
Burkholderia cenocepacia
J2315 |
New product name: RND-1 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-1 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-1. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0593
|
Burkholderia cenocepacia
J2315 |
New product name: RND-1 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-1 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-1. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0592
|
Burkholderia cenocepacia
J2315 |
New product name: RND-1 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-1 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-1. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL1674
|
Burkholderia cenocepacia
J2315 |
New product name: RND-3 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-3 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-3; ; Major RND-3 substrates are nalidixic acid, ciprofloxacin, tobramycin, chlorhexidine. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL1676
|
Burkholderia cenocepacia
J2315 |
New product name: RND-3 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-3 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-3; ; Major RND-3 substrates are nalidixic acid, ciprofloxacin, tobramycin, chlorhexidine. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL1675
|
Burkholderia cenocepacia
J2315 |
New product name: RND-3 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-3 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-3; ; Major RND-3 substrates are nalidixic acid, ciprofloxacin, tobramycin, chlorhexidine. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL2822
|
Burkholderia cenocepacia
J2315 |
New product name: RND-4 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-4 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-4; Major RND-4 substrates are aztreonam, chloramphenicol, fluoroquinolones, tobramycin. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL2820
|
Burkholderia cenocepacia
J2315 |
New product name: RND-4 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-4 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-4; Major RND-4 substrates are aztreonam, chloramphenicol, fluoroquinolones, tobramycin. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL2821
|
Burkholderia cenocepacia
J2315 |
New product name: RND-4 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-4 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-4; Major RND-4 substrates are aztreonam, chloramphenicol, fluoroquinolones, tobramycin. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0925
|
Burkholderia cenocepacia
J2315 |
New product name: RND-8 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-8 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-8; Major RND-8 substrate is tobramycin (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0927
|
Burkholderia cenocepacia
J2315 |
New product name: RND-8 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-8 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-8; Major RND-8 substrate is tobramycin (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0926
|
Burkholderia cenocepacia
J2315 |
New product name: RND-8 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-8 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-8; Major RND-8 substrate is tobramycin (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM1945
|
Burkholderia cenocepacia
J2315 |
New product name: RND-9 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-9 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-9; Major RND-9 substrate is tobramycin, chlorhexidine (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM1947
|
Burkholderia cenocepacia
J2315 |
New product name: RND-9 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-9 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-9; Major RND-9 substrate is tobramycin, chlorhexidine (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM1946
|
Burkholderia cenocepacia
J2315 |
New product name: RND-9 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-9 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-9; Major RND-9 substrate is tobramycin, chlorhexidine (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Feb 4, 2013 |
Bmul_2785
|
Burkholderia multivorans
ATCC 17616 |
New product name: SlyB. New gene name: slyB. New product name confidence: Class 1. New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 1. New PubMed reference: 16500084.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL3426
|
Burkholderia cenocepacia
J2315 |
New product name: SlyB. New gene name: slyB. New product name confidence: Class 2. New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 2. New PubMed reference: 16500084.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL2157
|
Burkholderia cenocepacia
J2315 |
New product name: SuhB. New product name confidence: Class 1. New GO Accession: GO:0015628(IMP). New GO Accession: GO:0033103(IMP). New GO Accession: GO:0071978(IMP). New GO Accession: GO:0044010(IMP). New GO Accession: GO:0046677(IMP). New PubMed reference: 22767545.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1892
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TagAB-4. New gene name: tagAB-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0862
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TagAB-5. New gene name: tagAB-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1891
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TagB-4. New gene name: tagB-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0861
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TagB-5. New gene name: tagB-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1890
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TagC-4. New gene name: tagC-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0860
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TagC-5. New gene name: tagC-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1889
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TagD-4. New gene name: tagD-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0859
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TagD-5. New gene name: tagD-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2955
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TagF-1. New gene name: tagF-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0138
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TagJ-2. New gene name: tagJ-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0139
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TagK-2. New gene name: tagK-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0120
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TagL-2. New gene name: tagL-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2965
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TagM-1. New gene name: tagM-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2956
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TagN-1. New gene name: tagN-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
bglu_2g14490
|
Burkholderia glumae
BGR1 |
New product name: TofI. New gene name: tofI. New PubMed reference: 23284909.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
bglu_2g14480
|
Burkholderia glumae
BGR1 |
New product name: TofM. New gene name: tofM. New PubMed reference: 23284909.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
bglu_2g14470
|
Burkholderia glumae
BGR1 |
New product name: TofR. New gene name: tofR. New PubMed reference: 23284909.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2418
|
Burkholderia cenocepacia
J2315 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 1. New comment: Comparative DNA sequence analysis of BCAM2418 genes (structural and promoter regions) of various B. cenocepacia isolates revealed that their lengths greatly vary according to the number of repetitive elements (PMID:32097539). New PMIDs: 22919579, 32097539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BURCENK562V_RS15440
|
Burkholderia cenocepacia
K56-2Valvano |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 1. New PMIDs: 22919579, 32097539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
WQ49_RS07805
|
Burkholderia cenocepacia
K56-2 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 1. New PMIDs: 22919579, 32097539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM1115
|
Burkholderia cenocepacia
J2315 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BURCENK562V_RS08875
|
Burkholderia cenocepacia
K56-2Valvano |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
WQ49_RS15905
|
Burkholderia cenocepacia
K56-2 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0236
|
Burkholderia cenocepacia
J2315 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
WQ49_RS10080
|
Burkholderia cenocepacia
K56-2 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0335
|
Burkholderia cenocepacia
J2315 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
WQ49_RS09590
|
Burkholderia cenocepacia
K56-2 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0219
|
Burkholderia cenocepacia
J2315 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMIDs: 22919579, 20019083.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
WQ49_RS20325
|
Burkholderia cenocepacia
K56-2 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMIDs: 22919579, 20019083.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2957
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssA-1. New gene name: tssA-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0134
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssA-2. New gene name: tssA-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1902
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssA-4. New gene name: tssA-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0873
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssA-5. New gene name: tssA-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2964
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssB-1. New gene name: tssB-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0121
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssB-2. New gene name: tssB-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1901
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssB-4. New gene name: tssB-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0870
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssB-5. New gene name: tssB-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2963
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssC-1. New gene name: tssC-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0122
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssC-2. New gene name: tssC-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1900
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssC-4. New gene name: tssC-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0869
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: TssC-5. New gene name: tssC-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|