Sep 15, 2008 |
Bcep18194_B0094
|
|
New gene name: ecfK. New product name: sigma factor 70 EcfK. New product name confidence: Class 1. New homology: 89% identity to ecfK [B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
Sep 15, 2008 |
Bcen_5259
|
|
New gene name: ecfK. New product name: sigma factor 70 EcfK. New product name confidence: Class 1. New homology: 94% identity to ecfK [B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
Sep 15, 2008 |
Bcen2424_5600
|
|
New gene name: ecfK. New product name: sigma factor 70 EcfK. New product name confidence: Class 1. New homology: 94% identity to ecfK [B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
Sep 15, 2008 |
Bcenmc03_4628
|
Burkholderia cenocepacia
MC0-3 |
New gene name: ecfK. New product name: sigma factor 70 EcfK. New product name confidence: Class 1. New homology: 94% identity to ecfK [B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
Apr 22, 2009 |
BCAM0849
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfL. New product name: sigma factor 70 EcfL. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Sep 15, 2008 |
Bamb_5540
|
|
New gene name: ecfL. New product name: sigma factor 70 EcfL. New product name confidence: Class 1. New homology: 76% identity to ecfL[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
Sep 15, 2008 |
Bcep18194_B2282
|
|
New gene name: ecfL. New product name: sigma factor 70 EcfL. New product name confidence: Class 1. New homology: 77% identity to ecfL[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
Sep 15, 2008 |
Bcen_4549
|
|
New gene name: ecfL. New product name: sigma factor 70 EcfL. New product name confidence: Class 1. New homology: 79% identity to ecfL[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
Sep 15, 2008 |
Bcen2424_3814
|
|
New gene name: ecfL. New product name: sigma factor 70 EcfL. New product name confidence: Class 1. New homology: 79% identity to ecfL[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
Sep 15, 2008 |
Bcenmc03_3710
|
Burkholderia cenocepacia
MC0-3 |
New gene name: ecfL. New product name: sigma factor 70 EcfL. New product name confidence: Class 1. New homology: 79% identity to ecfL[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
Apr 22, 2009 |
BCAL3486
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfM. New product name: sigma factor 70 EcfM. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
Sep 15, 2008 |
Bcenmc03_0038
|
Burkholderia cenocepacia
MC0-3 |
New gene name: ecfM. New product name: sigma factor 70 EcfM. New product name confidence: Class 1. New homology: 83% identity to ecfM [B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
Sep 15, 2008 |
Bcep18194_A3204
|
|
New gene name: ecfM. New product name: sigma factor 70 EcfM. New product name confidence: Class 1. New homology: 83% identity to ecfM [B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
Sep 15, 2008 |
Bamb_0012
|
|
New gene name: ecfM. New product name: sigma factor 70 EcfM. New product name confidence: Class 1. New homology: 84% identity to ecfM [B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
Sep 15, 2008 |
Bcen_0051
|
|
New gene name: ecfM. New product name: sigma factor 70 EcfM. New product name confidence: Class 1. New homology: 86% identity to ecfM [B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
Sep 15, 2008 |
Bcen2424_0019
|
|
New gene name: ecfM. New product name: sigma factor 70 EcfM. New product name confidence: Class 1. New homology: 86% identity to ecfM [B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
Apr 30, 2018 |
BTH_I2393
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: fenI. New product name confidence: Class 2. New PubMed ID: 29087175. New comment: .Annotation transferred from: UniProtKB:Q9L7W7.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0249
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: fha-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 30, 2018 |
AK34_RS17810
|
Burkholderia dolosa
AU0158 |
New gene name: fixJ. New product name: FixJ. New product name synonym: two-component response regulator FixJ. New product name confidence: Class 1. New PubMed ID: 28046077. New comment: .Annotation transferred from: UniProtKB:P10958.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
AK34_RS08900
|
Burkholderia dolosa
AU0158 |
New gene name: fixK. New product name: FixK. New product name confidence: Class 2. New PubMed ID: 28046077. New comment: .Annotation transferred from: UniProtKB:P13295.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM0049
|
Burkholderia cenocepacia
J2315 |
New gene name: fixK. New product name: FixK. New product name confidence: Class 2. New PubMed ID: 28046077. New comment: .Annotation transferred from: UniProtKB:P13295.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
AK34_RS17815
|
Burkholderia dolosa
AU0158 |
New gene name: fixL. New product name: FixL. New product name synonym: two-component sensor protein FixL. New product name confidence: Class 1. New PubMed ID: 28046077. New PubMed ID: 24316980. New comment: .Annotation transferred from: UniProtKB:P10955.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURCENK562V_RS0
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: fliI. New product name: FliI. New product name confidence: Class 1. New PubMed ID: 11895941.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BCAM2224
|
Burkholderia cenocepacia
J2315 |
New gene name: fptA. New product name confidence: Class 1. New PubMed ID: 15102796.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Sep 15, 2008 |
Bcen_0166
|
|
New gene name: fur. New product name: ferric uptake regulator Fur. New product name confidence: Class 2. New homology: 100% identity to Fur[B. cenocepacia J2315]. New evidence reference (PMID): 18057135.
|
Literature review. Based on article by Dennis, J. J. Department of Biological Sciences, University of Alberta, Edmonton, Alberta..
|
Sep 15, 2008 |
Bcen2424_0649
|
|
New gene name: fur. New product name: ferric uptake regulator Fur. New product name confidence: Class 2. New homology: 100% identity to Fur[B. cenocepacia J2315]. New evidence reference (PMID): 18057135.
|
Literature review. Based on article by Dennis, J. J. Department of Biological Sciences, University of Alberta, Edmonton, Alberta..
|
Sep 15, 2008 |
Bcenmc03_0616
|
Burkholderia cenocepacia
MC0-3 |
New gene name: fur. New product name: ferric uptake regulator Fur. New product name confidence: Class 2. New homology: 100% identity to Fur[B. cenocepacia J2315]. New evidence reference (PMID): 18057135.
|
Literature review. Based on article by Dennis, J. J. Department of Biological Sciences, University of Alberta, Edmonton, Alberta..
|
Sep 15, 2008 |
Bcep18194_A3735
|
|
New gene name: fur. New product name: ferric uptake regulator Fur. New product name confidence: Class 2. New homology: 98% identity to Fur[B. cenocepacia J2315]. New evidence reference (PMID): 18057135.
|
Literature review. Based on article by Dennis, J. J. Department of Biological Sciences, University of Alberta, Edmonton, Alberta..
|
Sep 15, 2008 |
Bamb_0544
|
|
New gene name: fur. New product name: ferric uptake regulator Fur. New product name confidence: Class 2. New homology: 99% identity to Fur[B. cenocepacia J2315]. New evidence reference (PMID): 18057135.
|
Literature review. Based on article by Dennis, J. J. Department of Biological Sciences, University of Alberta, Edmonton, Alberta..
|
Apr 22, 2009 |
Bxe_A0793
|
Burkholderia xenovorans
LB400 |
New gene name: fusA. New product name confidence: Class 1. New evidence reference (PMID): 10625618. New evidence reference (PMID): 17522847.
|
Literature review. Geoffrey L. Winsor, Simon Fraser University
|
Sep 15, 2008 |
Bcep18194_A5860
|
|
New gene name: fusA. New product name confidence: Class 2. New homology: 94% identity to FusA[ B. cenocepacia J2315][accession number CAR53040]. New evidence reference (PMID): 17187664.
|
Literature review. Based on article by Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta.
|
Sep 15, 2008 |
Bcep1808_2605
|
Burkholderia vietnamiensis
G4 |
New gene name: fusA. New product name confidence: Class 2. New homology: 96% identity to FusA[ B. cenocepacia J2315][accession number CAR53040]. New evidence reference (PMID): 17187664.
|
Literature review. Based on article by Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta.
|
Sep 15, 2008 |
Bamb_2576
|
|
New gene name: fusA. New product name confidence: Class 2. New homology: 96% identity to FusA[ B. cenocepacia J2315][accession number CAR53040]. New evidence reference (PMID): 17187664.
|
Literature review. Based on article by Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta.
|
Sep 15, 2008 |
Bcen_1916
|
|
New gene name: fusA. New product name confidence: Class 2. New homology: 97% identity to FusA[ B. cenocepacia J2315][accession number CAR53040]. New evidence reference (PMID): 17187664.
|
Literature review. Based on article by Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta.
|
Sep 15, 2008 |
Bcen2424_2528
|
|
New gene name: fusA. New product name confidence: Class 2. New homology: 97% identity to FusA[ B. cenocepacia J2315][accession number CAR53040]. New evidence reference (PMID): 17187664.
|
Literature review. Based on article by Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta.
|
Sep 15, 2008 |
Bcenmc03_2552
|
Burkholderia cenocepacia
MC0-3 |
New gene name: fusA. New product name confidence: Class 2. New homology: 97% identity to FusA[ B. cenocepacia J2315][accession number CAR53040]. New evidence reference (PMID): 17187664.
|
Literature review. Based on article by Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta.
|
Apr 30, 2018 |
BURCENK562V_RS29130
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: galE. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3117.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURPS668_0018
|
Burkholderia pseudomallei
668 |
New gene name: gspM. New product name confidence: Class 1. New PubMed ID: 24866793.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURPS668_0019
|
Burkholderia pseudomallei
668 |
New gene name: gspN. New PubMed ID: 24866793.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_I2962
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hcp-1. New product name: hcp-1. New pathway: T6SS-1 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0123
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hcp-2. New product name: Hcp-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1899
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hcp-4. New product name: Hcp-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0868
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hcp-5. New product name: Hcp-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0260
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hcp-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0742
|
|
New gene name: hcp1. New product name confidence: Class 1. New PubMed ID: 17555434. New PubMed ID: 21300775. New comment: Purified His-tagged BMAA0742 was recognized by glanders antiserum from a horse, a human and mice, indicating that this Hcp-family protein is produced in vivo during infection. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS20270
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: hemP. New product name confidence: Class 2. New PubMed ID: 28625994. New comment: .Annotation transferred from: BGD:Bmul_1072.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_1072
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hemP. New product name: Hemin uptake protein HemP. New product name confidence: Class 1. New PubMed ID: 28625994. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL2297
|
Burkholderia cenocepacia
J2315 |
New gene name: hemP. New product name: Hemin uptake protein HemP. New product name confidence: Class 2. New PubMed ID: 28625994. New comment: .Annotation transferred from: BGD:Bmul_1072.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURCENK562V_RS3
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: hldA. New product name confidence: Class 1. New PubMed ID: 16513737.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BURCENK562V_RS3
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: hldD. New product name confidence: Class 1. New PubMed ID: 16513737.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BAMB_RS28725
|
Burkholderia ambifaria
AMMD |
New gene name: hmqA. New product name confidence: Class 2. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1935
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hmqA. New product name confidence: Class 2. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BP1026B_II0535
|
Burkholderia pseudomallei
1026b |
New gene name: hmqA. New product name confidence: Class 2. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BAMB_RS28730
|
Burkholderia ambifaria
AMMD |
New gene name: hmqB. New product name confidence: Class 2. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1934
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hmqB. New product name confidence: Class 2. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BP1026B_II0536
|
Burkholderia pseudomallei
1026b |
New gene name: hmqB. New product name confidence: Class 2. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BAMB_RS28735
|
Burkholderia ambifaria
AMMD |
New gene name: hmqC. New product name confidence: Class 2. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1933
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hmqC. New product name confidence: Class 2. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BP1026B_II0537
|
Burkholderia pseudomallei
1026b |
New gene name: hmqC. New product name confidence: Class 2. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BAMB_RS28740
|
Burkholderia ambifaria
AMMD |
New gene name: hmqD. New product name confidence: Class 2. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1932
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hmqD. New product name confidence: Class 2. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BP1026B_II0538
|
Burkholderia pseudomallei
1026b |
New gene name: hmqD. New product name confidence: Class 2. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BAMB_RS28745
|
Burkholderia ambifaria
AMMD |
New gene name: hmqE. New product name confidence: Class 2. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1931
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hmqE. New product name confidence: Class 2. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BP1026B_II0539
|
Burkholderia pseudomallei
1026b |
New gene name: hmqE. New product name confidence: Class 2. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BAMB_RS28750
|
Burkholderia ambifaria
AMMD |
New gene name: hmqF. New product name confidence: Class 1. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BP1026B_II0540
|
Burkholderia pseudomallei
1026b |
New gene name: hmqF. New product name confidence: Class 1. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1930
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hmqF. New product name confidence: Class 1. New PubMed ID: 18539738. New PubMed ID: 28676791. New PubMed ID: 22320268. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BAMB_RS28755
|
Burkholderia ambifaria
AMMD |
New gene name: hmqG. New product name confidence: Class 1. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II1929
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hmqG. New product name confidence: Class 1. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BP1026B_II0541
|
Burkholderia pseudomallei
1026b |
New gene name: hmqG. New product name confidence: Class 1. New PubMed ID: 18539738. New PubMed ID: 28676791. New comment: Belongs to the HMAQ biosynthesis operon hmqABCDEFG
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_3338
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hmuR. New product name: TonB-dependent outer membrane heme receptor HmuR. New product name confidence: Class 1. New PubMed ID: 28625994. New PubMed ID: 22745846. New comment: Member of the hemin uptake (hmu) operon
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BTH_II2139
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hmuR. New product name: TonB-dependent outer membrane heme receptor HmuR. New product name confidence: Class 1. New PubMed ID: 28746878. New comment:
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAM2626
|
Burkholderia cenocepacia
J2315 |
New gene name: hmuR. New product name: TonB-dependent outer membrane heme receptor HmuR. New product name confidence: Class 2. New PubMed ID: 28625994. New PubMed ID: 22745846. New comment: Member of the hemin uptake (hmu) operon.Annotation transferred from: BGD:Bmul_3338.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
BURCENK562V_RS16510
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: hmuR. New product name: TonB-dependent outer membrane heme receptor HmuR. New product name confidence: Class 2. New PubMed ID: 28625994. New PubMed ID: 22745846. New comment: Member of the hemin uptake (hmu) operon.Annotation transferred from: BGD:Bmul_3338.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
Bmul_3337
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hmuS. New product name: cytoplasmic heme-binding protein/heme oxygenase HmuS. New PubMed ID: 28625994. New PubMed ID: 22745846. New comment: Member of the hemin uptake (hmu) operon
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
Bmul_3336
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hmuT. New product name: periplasmic heme-binding protein HmuT. New PubMed ID: 28625994. New PubMed ID: 22745846. New comment: Member of the hemin uptake (hmu) operon
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_3335
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hmuU. New product name: permease subunit of inner membrane heme transporter HmuU. New PubMed ID: 28625994. New PubMed ID: 22745846. New comment: Member of the hemin uptake (hmu) operon
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_2134
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hpnI. New product name confidence: Class 1. New PubMed ID: 22006009. New comment: Belongs to putative hopanoid biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_2133
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hpnJ. New product name confidence: Class 1. New PubMed ID: 22006009. New comment: Belongs to putative hopanoid biosynthesis gene cluster
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
Bmul_2132
|
Burkholderia multivorans
ATCC 17616 |
New gene name: hpnK. New product name confidence: Class 1. New PubMed ID: 22006009. New comment: Belongs to putative hopanoid biosynthesis gene cluster
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Sep 15, 2008 |
Bcep1808_0303
|
Burkholderia vietnamiensis
G4 |
New gene name: hppD. New product name: 4-hydroxyphenylpyruvic acid dioxygenase HppD. New product name confidence: Class 1. New homology: 96% identity to HppD [B. cenocepacia J2315]. New evidence reference (PMID): 17933889.
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Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
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Sep 15, 2008 |
Bamb_0240
|
|
New gene name: hppD. New product name: 4-hydroxyphenylpyruvic acid dioxygenase HppD. New product name confidence: Class 1. New homology: 96% identity to HppD [B. cenocepacia J2315]. New evidence reference (PMID): 17933889.
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Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
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Sep 15, 2008 |
Bcep18194_A3420
|
|
New gene name: hppD. New product name: 4-hydroxyphenylpyruvic acid dioxygenase HppD. New product name confidence: Class 1. New homology: 97% identity to HppD [B. cenocepacia J2315]. New evidence reference (PMID): 17933889.
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Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
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Sep 15, 2008 |
Bcen_2785
|
|
New gene name: hppD. New product name: 4-hydroxyphenylpyruvic acid dioxygenase HppD. New product name confidence: Class 1. New homology: 99% identity to HppD [B. cenocepacia J2315]. New evidence reference (PMID): 17933889.
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Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
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Sep 15, 2008 |
Bcen2424_0321
|
|
New gene name: hppD. New product name: 4-hydroxyphenylpyruvic acid dioxygenase HppD. New product name confidence: Class 1. New homology: 99% identity to HppD [B. cenocepacia J2315]. New evidence reference (PMID): 17933889.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
Sep 15, 2008 |
Bcenmc03_0301
|
Burkholderia cenocepacia
MC0-3 |
New gene name: hppD. New product name: 4-hydroxyphenylpyruvic acid dioxygenase HppD. New product name confidence: Class 1. New homology: 99% identity to HppD [B. cenocepacia J2315]. New evidence reference (PMID): 17933889.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
Apr 22, 2009 |
BCAL2829
|
Burkholderia cenocepacia
J2315 |
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 1. New evidence reference (PMID): 17220310.
|
Literature review. Valvano, M. A. University of Western Ontario, Ontario
|
Apr 10, 2015 |
BURCENK562V_RS0
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 1. New subcellular localization: Periplasmic (1). New subcellular localization evidence code (ECO): ECO:0000279 .New subcellular localization PMID: 17220310 .New PubMed ID: 17220310.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Sep 15, 2008 |
Bcep1808_2731
|
Burkholderia vietnamiensis
G4 |
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 89% identity to HtrA [B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
Sep 15, 2008 |
Bamb_2663
|
|
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 89% identity to HtrA [B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
Sep 15, 2008 |
Bcen_2006
|
|
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 92% identity to HtrA [B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
Sep 15, 2008 |
Bcen2424_2616
|
|
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 92% identity to HtrA [B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
Sep 15, 2008 |
Bcenmc03_2645
|
Burkholderia cenocepacia
MC0-3 |
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 92% identity to HtrA [B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
Sep 15, 2008 |
Bcep18194_A5947
|
|
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 92% identity to HtrA [B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
Apr 10, 2015 |
BMAA0729.1
|
|
New gene name: icmF1. New product name confidence: Class 2. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BURCENK562V_RS29160
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: kdoO. New product name: Kdo 3-hydroxylase KdoO. New gene name synonym: wbxY. New product name confidence: Class 2. New PubMed ID: 28085228. New PubMed ID: 21178073. New PubMed ID: 25204504. New comment: Responsible for Ko formation with Kdo2-lipid A as a substrate.Annotation transferred from: UniProtKB:E9NYT3.
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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Apr 30, 2018 |
CH72_RS04090
|
Burkholderia ambifaria
AMMD |
New gene name: kdoO. New product name: Kdo 3-hydroxylase KdoO. New product name confidence: Class 1. New PubMed ID: 21178073. New PubMed ID: 25204504. New comment: Responsible for Ko formation with Kdo2-lipid A as a substrate
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Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BamMC406_0785
|
Burkholderia ambifaria
MC40-6 |
New gene name: kdoO. New product name: Kdo 3-hydroxylase KdoO. New product name confidence: Class 1. New PubMed ID: 21178073. New PubMed ID: 25204504. New comment: Responsible for Ko formation with Kdo2-lipid A as a substrate
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BAMB_RS03910
|
Burkholderia ambifaria
AMMD |
New gene name: kdoO. New product name: Kdo 3-hydroxylase KdoO. New product name confidence: Class 1. New PubMed ID: 21178073. New PubMed ID: 25204504. New comment: Responsible for Ko formation with Kdo2-lipid A as a substrate
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|