Aug 1, 2008 |
Bcen2424_1639
|
|
New product name: ornibactin biosynthesis ABC transport protein, OrbE. New product name confidence: Class 3. New homology: 98% identity to ornibactin biosynthesis ABC transport protein, OrbE[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen_1159
|
|
New product name: ornibactin biosynthesis ABC transport protein, OrbE. New product name confidence: Class 3. New homology: 98% identity to ornibactin biosynthesis ABC transport protein, OrbE[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcep18194_A4785
|
|
New product name: ornibactin biosynthesis ABC transport protein, OrbE. New product name confidence: Class 3. New homology: 97% identity to ornibactin biosynthesis ABC transport protein, OrbE[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcenmc03_1614
|
Burkholderia cenocepacia
MC0-3 |
New gene name: orbE. New product name: ornibactin biosynthesis ABC transport protein, OrbE. New product name confidence: Class 3. New homology: 99% identity to ornibactin biosynthesis ABC transport protein, OrbE[B. cenocepacia J2315].
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bamb_1536
|
|
New product name: ornibactin biosynthesis ABC transport protein, OrbE. New product name confidence: Class 3. New homology: 95% identity to ornibactin biosynthesis ABC transport protein, OrbE[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen2424_1638
|
|
New product name: putative iron transport-related exported protein, OrbB. New product name confidence: Class 3. New homology: 97% identity to putative iron transport-related exported protein, OrbB [B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen_1158
|
|
New product name: putative iron transport-related exported protein, OrbB. New product name confidence: Class 3. New homology: 97% identity to putative iron transport-related exported protein, OrbB [B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcep18194_A4784
|
|
New product name: putative iron transport-related exported protein, OrbB. New product name confidence: Class 3. New homology: 94% identity to putative iron transport-related exported protein, OrbB [B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bamb_1535
|
|
New product name: putative iron transport-related exported protein, OrbB. New product name confidence: Class 3. New homology: 94% identity to putative iron transport-related exported protein, OrbB [B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcenmc03_1613
|
Burkholderia cenocepacia
MC0-3 |
New gene name: orbB. New product name: putative iron transport-related exported protein, OrbB. New product name confidence: Class 3. New homology: 97% identity to putative iron transport-related exported protein, OrbB [B. cenocepacia J2315].
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen2424_1635
|
|
New product name: putative iron transport-related ATP-binding protein, OrbC. New product name confidence: Class 3. New homology: 97% identity to putative iron transport-related ATP-binding protein, OrbC [B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen_1155
|
|
New product name: putative iron transport-related ATP-binding protein, OrbC. New product name confidence: Class 3. New homology: 97% identity to putative iron transport-related ATP-binding protein, OrbC [B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcep18194_A4781
|
|
New product name: putative iron transport-related ATP-binding protein, OrbC. New product name confidence: Class 3. New homology: 95% identity to putative iron transport-related ATP-binding protein, OrbC [B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bamb_1532
|
|
New product name: putative iron transport-related ATP-binding protein, OrbC. New product name confidence: Class 3. New homology: 92% identity to putative iron transport-related ATP-binding protein, OrbC [B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen_1156
|
|
New product name: putative iron transport-related membrane protein, OrbD. New product name confidence: Class 3. New homology: 97% identity to putative iron transport-related membrane protein, OrbD[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen2424_1636
|
|
New product name: putative iron transport-related membrane protein, OrbD. New product name confidence: Class 3. New homology: 97% identity to putative iron transport-related membrane protein, OrbD[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcep18194_A4782
|
|
New product name: putative iron transport-related membrane protein, OrbD. New product name confidence: Class 3. New homology: 96% identity to putative iron transport-related membrane protein, OrbD[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bamb_1533
|
|
New product name: putative iron transport-related membrane protein, OrbD. New product name confidence: Class 3. New homology: 93% identity to putative iron transport-related membrane protein, OrbD[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen2424_1633
|
|
New product name confidence: Class 3. New alternate product name: OrbH. New homology: 100% identity to OrbH[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen_1153
|
|
New product name confidence: Class 3. New alternate product name: OrbH. New homology: 100% identity to OrbH[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcep18194_A4779
|
|
New product name confidence: Class 3. New alternate product name: OrbH. New homology: 96% identity to OrbH[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bamb_1530
|
|
New product name confidence: Class 3. New alternate product name: OrbH. New homology: 96% identity to OrbH[B. cenocepacia J2315]. New evidence reference (PMID): 17295049.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen2424_1632
|
|
New alternate gene name: orbS. New alternate product name: putative RNA polymerase sigma factor, OrbS. New homology: 98% identity to OrbS[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen_1152
|
|
New alternate gene name: orbS. New alternate product name: putative RNA polymerase sigma factor, OrbS. New homology: 98% identity to OrbS[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bamb_1529
|
|
New alternate gene name: orbS. New alternate product name: putative RNA polymerase sigma factor, OrbS. New homology: 96% identity to OrbS[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcep18194_A4778
|
|
New alternate gene name: orbS. New alternate product name: putative RNA polymerase sigma factor, OrbS. New homology: 94% identity to OrbS[B. cenocepacia J2315]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 16672617.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen2424_5003
|
|
New gene name: pchA. New product name confidence: Class 2. New alternate product name: salicylate biosynthesis isochorismate synthase. New homology: 47% identity to salicylate biosynthesis isochorismate synthase [P. aeruginosa PAO1]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 7500944. New evidence reference (PMID): 12624097.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen_3364
|
|
New gene name: pchA. New product name confidence: Class 2. New alternate product name: salicylate biosynthesis isochorismate synthase. New homology: 47% identity to salicylate biosynthesis isochorismate synthase [P. aeruginosa PAO1]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 7500944. New evidence reference (PMID): 12624097.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcep18194_B0667
|
|
New gene name: pchA. New product name confidence: Class 2. New homology: 48% identity to salicylate biosynthesis isochorismate synthase [P. aeruginosa PAO1]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 7500944. New evidence reference (PMID): 12624097.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen2424_5002
|
|
New gene name: pchB. New product name confidence: Class 2. New alternate product name: salicylate biosynthesis protein PchB. New homology: 73% identity to salicylate biosynthesis protein PchB[P. aeruginosa PAO1]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 11937513.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcen_3365
|
|
New gene name: pchB. New product name confidence: Class 2. New alternate product name: salicylate biosynthesis protein PchB. New homology: 70% identity to salicylate biosynthesis protein PchB[P. aeruginosa PAO1]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 11937513.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 1, 2008 |
Bcep18194_B0668
|
|
New gene name: pchB. New product name confidence: Class 2. New alternate product name: salicylate biosynthesis protein PchB. New homology: 73% identity to salicylate biosynthesis protein PchB[P. aeruginosa PAO1]. New evidence reference (PMID): 17295049. New evidence reference (PMID): 11937513.
|
Literature review. Thomas, M. S. University of Sheffield, Sheffield, UK
|
Aug 25, 2008 |
Bcep18194_A5982
|
|
New gene name: deh4p. New product name: putative haloacid permease, Deh4p . New product name confidence: Class 2. New homology: 79% identity to putative haloacid permease, Deh4p [B. cepacia MBA4]. New evidence reference (PMID): 17545323.
|
Literature Review. Tsang, Jimmy S. H. The University of Hong Kong
|
Aug 25, 2008 |
Bcenmc03_2684
|
Burkholderia cenocepacia
MC0-3 |
New gene name: deh4p. New product name: putative haloacid permease, Deh4p . New product name confidence: Class 2. New homology: 79% identity to putative haloacid permease, Deh4p [B. cepacia MBA4]. New evidence reference (PMID): 17545323.
|
Literature Review. Tsang, Jimmy S. H. The University of Hong Kong
|
Aug 25, 2008 |
Bcen2424_2655
|
|
New gene name: deh4p. New product name: putative haloacid permease, Deh4p . New product name confidence: Class 2. New homology: 79% identity to putative haloacid permease, Deh4p [B. cepacia MBA4]. New evidence reference (PMID): 17545323.
|
Literature Review. Tsang, Jimmy S. H. The University of Hong Kong
|
Aug 25, 2008 |
Bcen_2044
|
|
New gene name: deh4p. New product name: putative haloacid permease, Deh4p . New product name confidence: Class 2. New homology: 79% identity to putative haloacid permease, Deh4p [B. cepacia MBA4]. New evidence reference (PMID): 17545323.
|
Literature Review. Tsang, Jimmy S. H. The University of Hong Kong
|
Aug 25, 2008 |
Bcep1808_2766
|
Burkholderia vietnamiensis
G4 |
New gene name: deh4p. New product name: putative haloacid permease, Deh4p . New product name confidence: Class 2. New homology: 79% identity to putative haloacid permease, Deh4p [B. cepacia MBA4]. New evidence reference (PMID): 17545323.
|
Literature Review. Tsang, Jimmy S. H. The University of Hong Kong
|
Aug 25, 2008 |
Bamb_2702
|
|
New gene name: deh4p. New product name: putative haloacid permease, Deh4p . New product name confidence: Class 2. New homology: 79% identity to putative haloacid permease, Deh4p [B. cepacia MBA4]. New evidence reference (PMID): 17545323.
|
Literature Review. Tsang, Jimmy S. H. The University of Hong Kong
|
Aug 25, 2008 |
BamMC406_2576
|
Burkholderia ambifaria
MC40-6 |
New gene name: deh4p. New product name: putative haloacid permease, Deh4p . New product name confidence: Class 2. New homology: 79% identity to putative haloacid permease, Deh4p [B. cepacia MBA4]. New evidence reference (PMID): 17545323.
|
Literature Review. Tsang, Jimmy S. H. The University of Hong Kong
|
Apr 22, 2009 |
BCAL0207
|
Burkholderia cenocepacia
J2315 |
New product name: 4-hydroxyphenylpyruvic acid dioxygenase HppD. New product name confidence: Class 1. New homology: 63% identity to HppD[A. hydrophila]. New homology: 57% idenity to HppD[P. fluorescens]. New homology: 32% idenity to HppD[S. avermitilis]. New evidence reference (PMID): 17933889.
|
Literature review. Valvano, M. A. University of Western Ontario, London, Ontario
|
Apr 22, 2009 |
BCAM1867
|
Burkholderia cenocepacia
J2315 |
New gene name: mgtC. New product name confidence: Class 1. New evidence reference (PMID): 16988222.
|
Literature review. Valvano, M. A. University of Western Ontario, London, Ontario
|
Apr 22, 2009 |
BCAL0813
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New evidence reference (PMID): 18195023.
|
Literature review. Valvano, M. A. University of Western Ontario, London, Ontario
|
Apr 22, 2009 |
BCAL2829
|
Burkholderia cenocepacia
J2315 |
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 1. New evidence reference (PMID): 17220310.
|
Literature review. Valvano, M. A. University of Western Ontario, Ontario
|
Aug 25, 2008 |
Bcep18194_B1180
|
|
New gene name: tftC. New product name confidence: Class 2. New alternate product name: TftC. New homology: 43% identity to TftC [B. cepacia AC1100]. New evidence reference (PMID): 12700257.
|
Literature Review. Xun, L. Washington State University, Pullman, Washington
|
Aug 25, 2008 |
Bamb_5345
|
|
New gene name: tftC. New product name confidence: Class 2. New alternate product name: TftC. New homology: 42% identity to TftC [B. cepacia AC1100]. New evidence reference (PMID): 12700257.
|
Literature Review. Xun, L. Washington State University, Pullman, Washington
|
Aug 25, 2008 |
Bcen2424_3609
|
|
New gene name: tftC. New product name confidence: Class 2. New alternate product name: TftC. New homology: 42% identity to TftC [B. cepacia AC1100]. New evidence reference (PMID): 12700257.
|
Literature Review. Xun, L. Washington State University, Pullman, Washington
|
Aug 25, 2008 |
Bcen_4906
|
|
New gene name: tftC. New product name confidence: Class 2. New alternate product name: TftC. New homology: 42% identity to TftC [B. cepacia AC1100]. New evidence reference (PMID): 12700257.
|
Literature Review. Xun, L. Washington State University, Pullman, Washington
|
Aug 25, 2008 |
Bcep1808_5413
|
Burkholderia vietnamiensis
G4 |
New gene name: tftC. New product name confidence: Class 2. New alternate product name: TftC. New homology: 42% identity to TftC [B. cepacia AC1100]. New evidence reference (PMID): 12700257.
|
Literature Review. Xun, L. Washington State University, Pullman, Washington
|
Apr 30, 2018 |
BCAL3311
|
Burkholderia cenocepacia
J2315 |
New gene name: bcnA. New product name: BcnA. New product name confidence: Class 1. New subcellular localization: Extracellular (Class 1). New subcellular localization evidence code (ECO): ECO:0000279. New subcellular localization PMID: 28292982. New PubMed ID: 28292982. New comment:
|
Miguel Valvano, Queen's University of Belfast
|
Apr 30, 2018 |
BCAL3310
|
Burkholderia cenocepacia
J2315 |
New gene name: bcnB. New product name: BcnB. New product name confidence: Class 1. New PubMed ID: 28292982. New comment:
|
Miguel Valvano, Queen's University of Belfast
|
Jan 29, 2010 |
BCAL1700
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 1. New evidence reference (PMID): 10456885. New evidence reference (PMID): 11083760.
|
Pamela A. Sokol, University of Calgary
|
Jan 29, 2010 |
BCAS0333
|
Burkholderia cenocepacia
J2315 |
New product name: putative siderophore receptor. New product name confidence: Class 3. Dropped gene name: orbA.
|
Pamela A. Sokol, University of Calgary
|
Jan 29, 2010 |
BCAL1699
|
Burkholderia cenocepacia
J2315 |
New product name: L-ornithine N(5)-oxygenase. New product name confidence: Class 1. New evidence reference (PMID): 10456885.
|
Pamela A. Sokol, University of Calgary
|