Log of Annotation Updates

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Date Locus Tag Strain Description Submitter
Aug 25, 2008 Bcep18194_A4085 New gene name: alkB. New product name: alkane hydroxylase AlkB. New product name confidence: Class 2. New homology: 89% identity to AlkB [B. cepacia RR10]. New evidence reference (PMID): 11418560. Literature Review. Rojom, Fernando. Centro Nacional de Biotecnologia, Madrid, Spain
Aug 25, 2008 Bcep1808_0897 Burkholderia vietnamiensis G4 New gene name: alkB. New product name: alkane hydroxylase AlkB. New product name confidence: Class 2. New homology: 89% identity to AlkB [B. cepacia RR10]. New evidence reference (PMID): 11418560. Literature Review. Rojom, Fernando. Centro Nacional de Biotecnologia, Madrid, Spain
Apr 10, 2015 BURCENK562V_RS1 Burkholderia cenocepacia K56-2Valvano New gene name: amiI. New product name confidence: Class 1. New PubMed ID: 14977960. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 20, 2020 BMULJ_RS27615 Burkholderia multivorans ATCC 17616 New gene name: ampC1. New gene name synonym: ampC. New product name synonym: AmpC1. New product name confidence: Class 2. New comment: AmpC1 from B. multivorans ATCC 17616 possesses a narrow spectrum, and the contribution of AmpC1 to _-lactam resistance appears to be negligible, yet expression of AmpC1 is regulated by _-lactam inducers including imipenem (PMID:30012762). New PMID: 30012762. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 20, 2020 DM80_RS04270 Burkholderia multivorans DDS 15A-1 New gene name: ampC1. New gene name synonym: ampC. New product name synonym: AmpC1. New product name confidence: Class 2. New PMID: 30012762. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 20, 2020 Bmul_6008 Burkholderia multivorans ATCC 17616 New gene name: ampC1. New gene name synonym: ampC. New product name: class C beta-lactamase. New product name confidence: Class 1. New comment: AmpC1 from B. multivorans ATCC 17616 possesses a narrow spectrum, and the contribution of AmpC1 to _-lactam resistance appears to be negligible, yet expression of AmpC1 is regulated by _-lactam inducers including imipenem (PMID:30012762). New PMID: 30012762. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 20, 2020 C6Q10_RS14220 Burkholderia multivorans AU19564 New gene name: ampC2. New gene name synonym: ampC. New product name: class C beta-lactamase. New product name synonym: AmpC2. New product name confidence: Class 2. New PMID: 30012762. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BURCENK562V_RS22190 Burkholderia cenocepacia K56-2Valvano New gene name: arnA1. New product name confidence: Class 2. New PubMed ID: 22742453. New PubMed ID: 15809294. New PubMed ID: 17337576. New PubMed ID: 27597847. New comment: In PMID:27597847: arnT, arnB, arnC, arnA1, arnA2 and BURCENK562V_RS22180 ortholog BCAL1935 located in the arn gene cluster harbored significantly low frequencies of transposon insertions (TraDIS). They were therefore categorized as essential by the authors..Annotation transferred from: BGD:BCAL1933. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BCAL1933 Burkholderia cenocepacia J2315 New gene name: arnA1. New product name: putative UDP-4-deoxy-4-formamido-l-arabinose formyltransferase. New product name confidence: Class 2. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BURCENK562V_RS22185 Burkholderia cenocepacia K56-2Valvano New gene name: arnA2. New product name confidence: Class 2. New PubMed ID: 22742453. New PubMed ID: 15809294. New PubMed ID: 17337576. New PubMed ID: 27597847. New comment: In PMID:27597847: arnT, arnB, arnC, arnA1, arnA2 and BURCENK562V_RS22180 ortholog BCAL1935 located in the arn gene cluster harbored significantly low frequencies of transposon insertions (TraDIS). They were therefore categorized as essential by the authors..Annotation transferred from: BGD:BCAL1934. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BCAL1934 Burkholderia cenocepacia J2315 New gene name: arnA2. New product name: putative UDP-4′-keto-5′-carboxypentose decarboxylase. New product name confidence: Class 2. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BURCENK562V_RS22200 Burkholderia cenocepacia K56-2Valvano New gene name: arnB. New product name confidence: Class 2. New PubMed ID: 22742453. New PubMed ID: 17337576. New PubMed ID: 27597847. New comment: In PMID:27597847: arnT, arnB, arnC, arnA1, arnA2 and BURCENK562V_RS22180 ortholog BCAL1935 located in the arn gene cluster harbored significantly low frequencies of transposon insertions (TraDIS). They were therefore categorized as essential by the authors..Annotation transferred from: BGD:BCAL1931. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BURCENK562V_RS22195 Burkholderia cenocepacia K56-2Valvano New gene name: arnC. New product name confidence: Class 2. New PubMed ID: 22742453. New PubMed ID: 17337576. New PubMed ID: 27597847. New comment: In PMID:27597847: arnT, arnB, arnC, arnA1, arnA2 and BURCENK562V_RS22180 ortholog BCAL1935 located in the arn gene cluster harbored significantly low frequencies of transposon insertions (TraDIS). They were therefore categorized as essential by the authors..Annotation transferred from: BGD:BCAL1932. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BCAL1932 Burkholderia cenocepacia J2315 New gene name: arnC. New product name: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BURCENK562V_RS22210 Burkholderia cenocepacia K56-2Valvano New gene name: arnT. New product name: 4-amino-4-deoxy-L-arabinose transferase ArnT. New product name confidence: Class 2. New subcellular localization: Cytoplasmic membrane (Class 2). New subcellular localization evidence code (ECO): ECO:0000314. New subcellular localization cross-ref: BGD:BCAL1929. New subcellular localization PMID: 26030265. New PubMed ID: 22742453. New PubMed ID: 26515403. New PubMed ID: 26030265. New PubMed ID: 11535604. New PubMed ID: 17337576. New PubMed ID: 27597847. New comment: In PMID:27597847: arnT, arnB, arnC, arnA1, arnA2 and BURCENK562V_RS22180 ortholog BCAL1935 located in the arn gene cluster harbored significantly low frequencies of transposon insertions (TraDIS). They were therefore categorized as essential by the authors..Annotation transferred from: BGD:BCAL1929. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BCAL1929 Burkholderia cenocepacia J2315 New gene name: arnT. New product name: aminoarabinose transferase. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 22, 2009 BCAM0379 Burkholderia cenocepacia J2315 New gene name: atsR. New product name: adherence and T6 secretion system regulator AtsR. New product name confidence: Class 1. New homology: 19% identity to RetS [P. aeruginosa]. New evidence reference (PMID): 18316384. Literature review. Schell, M. A. University of Georgia, Athens, Georgia
Sep 15, 2008 Bamb_5145 New gene name: atsR. New product name: adherence and T6 secretion system regulator AtsR. New product name confidence: Class 1. New homology: 77% identity to AtsR [B. cenocepacia J2315]. New evidence reference (PMID): 18316384. Literature review. Based on article by Schell, M. A. University of Georgia, Athens, Georgia.
Sep 15, 2008 Bcep18194_B2888 New gene name: atsR. New product name: adherence and T6 secretion system regulator AtsR. New product name confidence: Class 1. New homology: 79% identity to AtsR [B. cenocepacia J2315]. New evidence reference (PMID): 18316384. Literature review. Based on article by Schell, M. A. University of Georgia, Athens, Georgia.
Sep 15, 2008 Bcen_4800 New gene name: atsR. New product name: adherence and T6 secretion system regulator AtsR. New product name confidence: Class 1. New homology: 82% identity to AtsR [B. cenocepacia J2315]. New evidence reference (PMID): 18316384. Literature review. Based on article by Schell, M. A. University of Georgia, Athens, Georgia.
Sep 15, 2008 Bcen2424_3368 New gene name: atsR. New product name: adherence and T6 secretion system regulator AtsR. New product name confidence: Class 1. New homology: 82% identity to AtsR [B. cenocepacia J2315]. New evidence reference (PMID): 18316384. Literature review. Based on article by Schell, M. A. University of Georgia, Athens, Georgia.
Sep 15, 2008 Bcenmc03_4148 Burkholderia cenocepacia MC0-3 New gene name: atsR. New product name: adherence and T6 secretion system regulator AtsR. New product name confidence: Class 1. New homology: 82% identity to AtsR [B. cenocepacia J2315]. New evidence reference (PMID): 18316384. Literature review. Based on article by Schell, M. A. University of Georgia, Athens, Georgia.
Apr 30, 2018 I35_RS17890 Burkholderia cenocepacia H111 New gene name: atsR. New product name: hybrid two-component system kinase-response regulator protein AtsR. New product name confidence: Class 1. New PubMed ID: 22830644. New comment: Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BURCENK562V_RS1 Burkholderia cenocepacia K56-2Valvano New gene name: atsR. New product name: hybrid two-component system kinase-response regulator protein, AtsR. New product name confidence: Class 1. New PubMed ID: 18316384. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1528 Burkholderia pseudomallei K96243 New gene name: bapA. New product name: type III secretion system effector protein BapA (T3SS-3). New product name confidence: Class 1. New subcellular localization: Extracellular (Class 1). New subcellular localization evidence code (ECO): ECO:0000002. New subcellular localization PMID: 26624293. New PubMed ID: 26624293. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSL2237 Burkholderia pseudomallei K96243 New gene name: batA. New product name: Burkholderia autotransporter A, BatA. New product name confidence: Class 1. New PubMed ID: 25830295. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1439 Burkholderia pseudomallei K96243 New gene name: bbfA. New product name: BbfA. New product name confidence: Class 1. New PubMed ID: 25830295. New PubMed ID: 24223950. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BP1026B_II1054 Burkholderia pseudomallei 1026b New gene name: bcaA. New product name: Burkholderia classical autotransporter A, BcaA. New product name confidence: Class 1. New PubMed ID: 23340315. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS0962 Burkholderia pseudomallei K96243 New gene name: bcaA. New product name: Burkholderia classical autotransporter A, BcaA. New product name confidence: Class 1. New PubMed ID: 25830295. New PubMed ID: 23340315. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BP1026B_II1055 Burkholderia pseudomallei 1026b New gene name: bcaB. New product name: BcaB. New product name confidence: Class 1. New PubMed ID: 23340315. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS0963 Burkholderia pseudomallei K96243 New gene name: bcaB. New product name: BcaB. New product name confidence: Class 1. New PubMed ID: 25830295. New PubMed ID: 23340315. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 Bcep1808_4200 Burkholderia vietnamiensis G4 New gene name: bceA. New product name: BceA. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Cepacian biosynthesis confirmed in Burkholderia vietnamiensis G4(PMID:19948863). New genomic context: bce-I gene cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 AK34_RS07150 Burkholderia dolosa AU0158 New gene name: bceA. New product name: BceA. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 17184737. New PubMed ID: 18668237. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4200. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1835 Burkholderia pseudomallei K96243 New gene name: bceA. New product name: BceA. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 17184737. New PubMed ID: 18668237. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4200. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BTH_II0542 Burkholderia thailandensis E264 ATCC 700388 New gene name: bceA. New product name: BceA. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 17184737. New PubMed ID: 18668237. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4200. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 bglu_2g16540 Burkholderia glumae BGR1 New gene name: bceA. New product name: BceA. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 17184737. New PubMed ID: 18668237. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4200. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 Bmul_4920 Burkholderia multivorans ATCC 17616 New gene name: bceA. New product name: BceA. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 17184737. New PubMed ID: 18668237. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4200. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BAMB_RS27645 Burkholderia ambifaria AMMD New gene name: bceA. New product name: BceA. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 17184737. New PubMed ID: 18668237. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4200. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCEP18194_RS34115 Burkholderia lata 383 New gene name: bceA. New product name: BceA. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 17184737. New PubMed ID: 18668237. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4200. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 I35_RS20345 Burkholderia cenocepacia H111 New gene name: bceA. New product name: bifunctional exopolysaccharide biosynthesis protein (phosphomannose isomerase and GDP-D-mannose pyrophosphorylase) BceA. New product name confidence: Class 1. New PubMed ID: 19948863. New PubMed ID: 17184737. New PubMed ID: 18668237. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:BCAM0854. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BURCENK562V_RS07600 Burkholderia cenocepacia K56-2Valvano New gene name: bceA. New product name: bifunctional exopolysaccharide biosynthesis protein (phosphomannose isomerase and GDP-D-mannose pyrophosphorylase) BceA. New product name confidence: Class 1. New PubMed ID: 19948863. New PubMed ID: 17184737. New PubMed ID: 18668237. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:BCAM0854. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 Bcep1808_4201 Burkholderia vietnamiensis G4 New gene name: bceB. New product name: BceB. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Cepacian biosynthesis confirmed in Burkholderia vietnamiensis G4(PMID:19948863). New genomic context: bce-I gene cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 AK34_RS07145 Burkholderia dolosa AU0158 New gene name: bceB. New product name: undecaprenyl-phosphate glycosyl-1-phosphate transferase BceB. New product name synonym: priming glucosyltransferase BceB. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 15995219. New PubMed ID: 18667584. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4201. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1834 Burkholderia pseudomallei K96243 New gene name: bceB. New product name: undecaprenyl-phosphate glycosyl-1-phosphate transferase BceB. New PubMed ID: 19948863. New PubMed ID: 15995219. New PubMed ID: 18667584. New comment: Member of the bce-I gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BTH_II0543 Burkholderia thailandensis E264 ATCC 700388 New gene name: bceB. New product name: undecaprenyl-phosphate glycosyl-1-phosphate transferase BceB. New PubMed ID: 19948863. New PubMed ID: 15995219. New PubMed ID: 18667584. New comment: Member of the bce-I gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 bglu_2g16530 Burkholderia glumae BGR1 New gene name: bceB. New product name: undecaprenyl-phosphate glycosyl-1-phosphate transferase BceB. New PubMed ID: 19948863. New PubMed ID: 15995219. New PubMed ID: 18667584. New comment: Member of the bce-I gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 Bmul_4919 Burkholderia multivorans ATCC 17616 New gene name: bceB. New product name: undecaprenyl-phosphate glycosyl-1-phosphate transferase BceB. New PubMed ID: 19948863. New PubMed ID: 15995219. New PubMed ID: 18667584. New comment: Member of the bce-I gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BAMB_RS27650 Burkholderia ambifaria AMMD New gene name: bceB. New product name: undecaprenyl-phosphate glycosyl-1-phosphate transferase BceB. New PubMed ID: 19948863. New PubMed ID: 15995219. New PubMed ID: 18667584. New comment: Member of the bce-I gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 I35_RS20350 Burkholderia cenocepacia H111 New gene name: bceB. New product name: undecaprenyl-phosphate glycosyl-1-phosphate transferase BceB. New PubMed ID: 19948863. New PubMed ID: 15995219. New PubMed ID: 18667584. New comment: Member of the bce-I gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 Bcep1808_4202 Burkholderia vietnamiensis G4 New gene name: bceC. New product name: BceC. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Cepacian biosynthesis confirmed in Burkholderia vietnamiensis G4(PMID:19948863). New genomic context: bce-I gene cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 AK34_RS07140 Burkholderia dolosa AU0158 New gene name: bceC. New product name: UDP-Glucose Dehydrogenase BceC. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 21602353. New PubMed ID: 20208157. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4202. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1833 Burkholderia pseudomallei K96243 New gene name: bceC. New product name: UDP-Glucose Dehydrogenase BceC. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 21602353. New PubMed ID: 20208157. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4202. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BTH_II0544 Burkholderia thailandensis E264 ATCC 700388 New gene name: bceC. New product name: UDP-Glucose Dehydrogenase BceC. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 21602353. New PubMed ID: 20208157. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4202. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 Bmul_4918 Burkholderia multivorans ATCC 17616 New gene name: bceC. New product name: UDP-Glucose Dehydrogenase BceC. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 21602353. New PubMed ID: 20208157. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4202. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BAMB_RS27655 Burkholderia ambifaria AMMD New gene name: bceC. New product name: UDP-Glucose Dehydrogenase BceC. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 21602353. New PubMed ID: 20208157. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4202. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 I35_RS20355 Burkholderia cenocepacia H111 New gene name: bceC. New product name: UDP-Glucose Dehydrogenase BceC. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 21602353. New PubMed ID: 20208157. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4202. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BURCENK562V_RS07610 Burkholderia cenocepacia K56-2Valvano New gene name: bceC. New product name: UDP-Glucose Dehydrogenase BceC. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 21602353. New PubMed ID: 20208157. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4202. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCEP18194_RS34105 Burkholderia lata 383 New gene name: bceC. New product name: UDP-Glucose Dehydrogenase BceC. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 21602353. New PubMed ID: 20208157. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4202. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Sep 15, 2008 Bcep1808_4203 Burkholderia vietnamiensis G4 New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 1. New homology: 88% identity to BceD[ B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Sep 15, 2008 Bamb_5548 New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 1. New homology: 88% identity to BceD[ B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Sep 15, 2008 Bcen_4541 New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 1. New homology: 91% identity to BceD[ B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Sep 15, 2008 Bcen2424_3822 New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 1. New homology: 91% identity to BceD[ B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Sep 15, 2008 Bcenmc03_3702 Burkholderia cenocepacia MC0-3 New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 1. New homology: 91% identity to BceD[ B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Sep 15, 2008 Bcep18194_B2274 New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 1. New homology: 92% identity to BceD[ B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Apr 30, 2018 AK34_RS07135 Burkholderia dolosa AU0158 New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 19948863. New PubMed ID: 26590274. New PubMed ID: 25486990. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4203. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1832 Burkholderia pseudomallei K96243 New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 19948863. New PubMed ID: 26590274. New PubMed ID: 25486990. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4203. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BTH_II0545 Burkholderia thailandensis E264 ATCC 700388 New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 19948863. New PubMed ID: 26590274. New PubMed ID: 25486990. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4203. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 bglu_2g16510 Burkholderia glumae BGR1 New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 19948863. New PubMed ID: 26590274. New PubMed ID: 25486990. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4203. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 Bmul_4917 Burkholderia multivorans ATCC 17616 New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 19948863. New PubMed ID: 26590274. New PubMed ID: 25486990. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4203. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BAMB_RS27660 Burkholderia ambifaria AMMD New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 19948863. New PubMed ID: 26590274. New PubMed ID: 25486990. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4203. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 I35_RS20360 Burkholderia cenocepacia H111 New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 19948863. New PubMed ID: 26590274. New PubMed ID: 25486990. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4203. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BURCENK562V_RS07615 Burkholderia cenocepacia K56-2Valvano New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 19948863. New PubMed ID: 26590274. New PubMed ID: 25486990. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4203. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCEP18194_RS34100 Burkholderia lata 383 New gene name: bceD. New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 19948863. New PubMed ID: 26590274. New PubMed ID: 25486990. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4203. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 Bcep1808_4204 Burkholderia vietnamiensis G4 New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Cepacian biosynthesis confirmed in Burkholderia vietnamiensis G4(PMID:19948863). New genomic context: bce-I gene cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 AK34_RS07130 Burkholderia dolosa AU0158 New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1831 Burkholderia pseudomallei K96243 New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BTH_II0546 Burkholderia thailandensis E264 ATCC 700388 New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 bglu_2g16500 Burkholderia glumae BGR1 New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 Bmul_4916 Burkholderia multivorans ATCC 17616 New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BAMB_RS27665 Burkholderia ambifaria AMMD New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 I35_RS20365 Burkholderia cenocepacia H111 New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BURCENK562V_RS07620 Burkholderia cenocepacia K56-2Valvano New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCEP18194_RS34095 Burkholderia lata 383 New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Sep 15, 2008 Bcep1808_4205 Burkholderia vietnamiensis G4 New gene name: bceF. New product name: tyrosine autokinase BceF. New product name confidence: Class 1. New homology: 89% identity to BceF[B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Sep 15, 2008 Bamb_5550 New gene name: bceF. New product name: tyrosine autokinase BceF. New product name confidence: Class 1. New homology: 89% identity to BceF[B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Sep 15, 2008 Bcen_4539 New gene name: bceF. New product name: tyrosine autokinase BceF. New product name confidence: Class 1. New homology: 91% identity to BceF[B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Sep 15, 2008 Bcen2424_3824 New gene name: bceF. New product name: tyrosine autokinase BceF. New product name confidence: Class 1. New homology: 91% identity to BceF[B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Sep 15, 2008 Bcep18194_B2272 New gene name: bceF. New product name: tyrosine autokinase BceF. New product name confidence: Class 1. New homology: 94% identity to BceF[B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Based on article by Moreira, L. M. Instituto Superior Tecnico, Av. Rovisco Pais, Portugal.
Apr 30, 2018 BPSS1830 Burkholderia pseudomallei K96243 New gene name: bceF. New product name: tyrosine kinase BceF. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 23435894. New PubMed ID: 25486990. New PubMed ID: 26590274. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4205. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BTH_II0547 Burkholderia thailandensis E264 ATCC 700388 New gene name: bceF. New product name: tyrosine kinase BceF. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 23435894. New PubMed ID: 25486990. New PubMed ID: 26590274. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4205. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 bglu_2g16490 Burkholderia glumae BGR1 New gene name: bceF. New product name: tyrosine kinase BceF. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 23435894. New PubMed ID: 25486990. New PubMed ID: 26590274. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4205. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 Bmul_4915 Burkholderia multivorans ATCC 17616 New gene name: bceF. New product name: tyrosine kinase BceF. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 23435894. New PubMed ID: 25486990. New PubMed ID: 26590274. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4205. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BAMB_RS27670 Burkholderia ambifaria AMMD New gene name: bceF. New product name: tyrosine kinase BceF. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 23435894. New PubMed ID: 25486990. New PubMed ID: 26590274. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4205. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 I35_RS20370 Burkholderia cenocepacia H111 New gene name: bceF. New product name: tyrosine kinase BceF. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 23435894. New PubMed ID: 25486990. New PubMed ID: 26590274. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4205. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BURCENK562V_RS07625 Burkholderia cenocepacia K56-2Valvano New gene name: bceF. New product name: tyrosine kinase BceF. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 23435894. New PubMed ID: 25486990. New PubMed ID: 26590274. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4205. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCEP18194_RS34090 Burkholderia lata 383 New gene name: bceF. New product name: tyrosine kinase BceF. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 23435894. New PubMed ID: 25486990. New PubMed ID: 26590274. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4205. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 AK34_RS07125 Burkholderia dolosa AU0158 New gene name: bceF. New product name: tyrosine kinase BceF. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 23435894. New PubMed ID: 25486990. New PubMed ID: 26590274. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4205. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 AK34_RS07120 Burkholderia dolosa AU0158 New gene name: bceG. New product name: BceG. New product name confidence: Class 2. New PubMed ID: 14637140. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4206. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1829 Burkholderia pseudomallei K96243 New gene name: bceG. New product name: BceG. New product name confidence: Class 2. New PubMed ID: 14637140. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4206. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BTH_II0548 Burkholderia thailandensis E264 ATCC 700388 New gene name: bceG. New product name: BceG. New product name confidence: Class 2. New PubMed ID: 14637140. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4206. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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