Log of Annotation Updates

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Date Locus Tag Strain Description Submitter
Feb 4, 2013 BCAM1339 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1338 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1337 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1336 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1335 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1334 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1333 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1332 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IMP). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1331 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IMP). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1330 Burkholderia cenocepacia J2315 New GO Accession: GO:0044010(IMP). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 22, 2009 BCAM1259 Burkholderia cenocepacia J2315 New gene name: sigJ. New product name: sigma factor 70 SigJ. New product name confidence: Class 1. New evidence reference (PMID): 17784948. Literature review. Raymond C. Lo, Simon Fraser University
Apr 20, 2020 BCAM1115 Burkholderia cenocepacia J2315 New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAM1011 Burkholderia cenocepacia J2315 New gene name: bceU. New product name: acyltransferase BceU. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Since bceU is found in the genome sequences of all Bcc strains as well as in B. thailandensis, B. oklahomensis, and B. pseudomallei strains, the authors of PMID:19948863 considered it to belong as part of bce-II gene cluster.. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4480. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAM1010 Burkholderia cenocepacia J2315 New gene name: bceT. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4479. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAM1009 Burkholderia cenocepacia J2315 New gene name: bceS. New product name: acyltransferase BceS. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Note that another gene (BCAM1494) for a two-component sensor kinase in B. cenocepacia J2315 was also assigned the name bceS at a later date (PMID:25519693).. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4477. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAM1008 Burkholderia cenocepacia J2315 New gene name: bceR. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Disruption of the bceQ and bceR genes, in B. cepacia IST408 (PMID:19948863) resulted in the abolishment of cepacian biosynthesis. . New comment: Note that another gene (BCAM1493) for a two-component response regulator in B. cenocepacia J2315 was also assigned the name bceR at a later date (PMID:25519693).. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4476. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAM1007 Burkholderia cenocepacia J2315 New gene name: bceQ. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Disruption of the bceQ and bceR genes, in B. cepacia IST408 (PMID:19948863) resulted in the abolishment of cepacian biosynthesis. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4475. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAM1006 Burkholderia cenocepacia J2315 New gene name: bceP. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4474. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAM1005 Burkholderia cenocepacia J2315 New gene name: bceO. New product name: acyltransferase BceO. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4473. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAM1004 Burkholderia cenocepacia J2315 New gene name: bceN. New product name: GDP-D-mannose 4,6-dehydratase BceN. New product name confidence: Class 1. New PubMed ID: 23460819. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAM1003 Burkholderia cenocepacia J2315 New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Feb 4, 2013 BCAM0927 Burkholderia cenocepacia J2315 New GO Accession: GO:0071236(EXP). New PubMed reference: 21781329. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 20, 2020 BCAM0927 Burkholderia cenocepacia J2315 New product name: RND-8 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-8 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-8; Major RND-8 substrate is tobramycin (in biofilm grown cells). New PMIDs: 25267676, 25926825. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Feb 4, 2013 BCAM0926 Burkholderia cenocepacia J2315 New GO Accession: GO:0071236(EXP). New PubMed reference: 21781329. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 20, 2020 BCAM0926 Burkholderia cenocepacia J2315 New product name: RND-8 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-8 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-8; Major RND-8 substrate is tobramycin (in biofilm grown cells). New PMIDs: 25267676, 25926825. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Feb 4, 2013 BCAM0925 Burkholderia cenocepacia J2315 New GO Accession: GO:0071236(EXP). New PubMed reference: 21781329. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 20, 2020 BCAM0925 Burkholderia cenocepacia J2315 New product name: RND-8 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-8 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-8; Major RND-8 substrate is tobramycin (in biofilm grown cells). New PMIDs: 25267676, 25926825. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 22, 2009 BCAM0918 Burkholderia cenocepacia J2315 New gene name: sigE. New product name: sigma factor 70 sigE. New product name confidence: Class 1. New evidence reference (PMID): 17784948. Literature review. Raymond C. Lo, Simon Fraser University
Apr 30, 2018 BCAM0865 Burkholderia cenocepacia J2315 New PubMed ID: 19948863. New comment: Removed gene name bceL because it was incorrectly assigned in a previous study. Analysis of other Burkholderia genomes including B. phytofirmans and B. xenovorans indicated that the protein was absent from the bce cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0865 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0865 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0864 Burkholderia cenocepacia J2315 New product name: BceK. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 22919582. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4210. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0864 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New GO Accession: GO:0016757(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0864 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New GO accession: GO:0016757 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0863 Burkholderia cenocepacia J2315 New product name: BceJ. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 22919582. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4209. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0863 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New GO Accession: GO:0016757(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0863 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New GO accession: GO:0016757 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0862 Burkholderia cenocepacia J2315 New product name: BceI. New product name confidence: Class 2. New PubMed ID: 14637140. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4208. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0862 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0862 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0861 Burkholderia cenocepacia J2315 New product name: BceH. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4207. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0861 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New GO Accession: GO:0016757(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0861 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New GO accession: GO:0016757 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0860 Burkholderia cenocepacia J2315 New product name: BceG. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4206. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0860 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New GO Accession: GO:0016757(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0860 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New GO accession: GO:0016757 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0859 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0859 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 22, 2009 BCAM0859 Burkholderia cenocepacia J2315 New product name: tyrosine autokinase BceF. New product name confidence: Class 1. New homology: 92% identity to BceF[B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Raymond C. Lo, Simon Fraser University
Apr 30, 2018 BCAM0859 Burkholderia cenocepacia J2315 New PubMed ID: 23435894. New PubMed ID: 25486990. New PubMed ID: 26590274. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0858 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0858 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0858 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 22, 2009 BCAM0857 Burkholderia cenocepacia J2315 New product name: phosphotyrosine phosphatase BceD. New product name confidence: Class 1. New homology: 90% identity to BceD[ B. cepacia IST408]. New evidence reference (PMID): 17114319. Literature review. Raymond C. Lo, Simon Fraser University
Apr 30, 2018 BCAM0857 Burkholderia cenocepacia J2315 New PubMed ID: 17114319. New PubMed ID: 19948863. New PubMed ID: 26590274. New PubMed ID: 25486990. New comment: Member of the bce-I gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0856 New gene name: bceD. New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New PubMed reference: 11006084. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0856 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New evidence reference (PMID): 11006084. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0856 New PubMed ID: 14637140. New PubMed ID: 15995219. New comment: Member of the bce-I gene cluster. New comment: The J2315 bceB gene nucleotide sequence exhibits a frameshift mutation which may be the cause of it's defect in cepacian EPS biosynthesis. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0855 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO Accession: GO:0045227(ISS). New PubMed reference: 14637140. New PubMed reference: 19383677. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0855 Burkholderia cenocepacia J2315 New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New evidence reference (PMID): 19383677. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0855 Burkholderia cenocepacia J2315 New product name: UDP-Glucose Dehydrogenase BceC. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 21602353. New PubMed ID: 20208157. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4202. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0854 Burkholderia cenocepacia J2315 New product name confidence: Class 1. New pathway: cepacian biosynthesis. New pathway: exopolysaccharide biosynthesis. New EC Number: 5.3.1.8;2.7.7.22. New GO accession: GO:0045227 [ISS]. New GO accession: GO:0004476 [IDA]. New GO accession: GO:0008928 [IDA]. New GO accession: GO:0003979 [IDA]. New evidence reference (PMID): 14637140. New evidence reference (PMID): 11006084. New evidence reference (PMID): 18668237. New evidence reference (PMID): 17184737. New genomic context: Burkholderia cepacia complex (bce) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0854 Burkholderia cenocepacia J2315 New PubMed ID: 19948863. New PubMed ID: 17184737. New PubMed ID: 18668237. New comment: Member of the bce-I gene cluster Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 22, 2009 BCAM0849 Burkholderia cenocepacia J2315 New gene name: ecfL. New product name: sigma factor 70 EcfL. New product name confidence: Class 1. New evidence reference (PMID): 17784948. Literature review. Raymond C. Lo, Simon Fraser University
Feb 4, 2013 BCAM0581 Burkholderia cenocepacia J2315 New product name: bifunctional crotonase homologue. New product name confidence: Class 1. New GO Accession: GO:0016297(IDA). New GO Accession: GO:0016836(IDA). New PubMed reference: 22949660. New PubMed reference: 18049456. New PubMed reference: 22221091. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0581 Burkholderia cenocepacia J2315 New gene name synonym: rpfF. New PubMed ID: 18049456. New PubMed ID: 23231487. New PubMed ID: 25681189. New PubMed ID: 26725701. New PubMed ID: 22221091. New comment: Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BCAM0581 Burkholderia cenocepacia J2315 New gene name: dfsA. New product name: diffusible factor synthase A. DfsA. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Feb 4, 2013 BCAM0580 Burkholderia cenocepacia J2315 New product name: Cis-2-dodecenoic acid receptor RpfR. New gene name: rpfR. New product name confidence: Class 1. New GO Accession: GO:0071111(IMP). New PubMed reference: 22949660. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM0580 Burkholderia cenocepacia J2315 New EC Number: 3.1.4.52. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 20, 2020 BCAM0450 Burkholderia cenocepacia J2315 New gene name: copD. New product name: CopD. New product name confidence: Class 2. New PMID: 32090500. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 20, 2020 BCAM0449 Burkholderia cenocepacia J2315 New gene name: copC. New product name: CopC. New product name confidence: Class 2. New PMID: 32090500. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 20, 2020 BCAM0448 Burkholderia cenocepacia J2315 New gene name: cusF. New product name: CusF. New product name confidence: Class 2. New PMID: 32090500. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 20, 2020 BCAM0443 Burkholderia cenocepacia J2315 New gene name: copR. New product name: CopR. New product name confidence: Class 2. Name transferred from: UniProtKB:Q47456. New PMID: 11004187. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 20, 2020 BCAM0442 Burkholderia cenocepacia J2315 New gene name: copS. New product name: CopS. New product name confidence: Class 2. Name transferred from: UniProtKB:Q47457. New PMID: 11004187. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0393 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New pathway: beta-Lactam resistance. New EC Number: 3.5.2.6. New GO Accession: GO:0008800(ISS). New PubMed reference: 9333046. New PubMed reference: 18931103. Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0393 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New pathway: beta-Lactam resistance. New EC Number: 3.5.2.6. New GO accession: GO:0008800 [ISS]. New evidence reference (PMID): 9333046. New evidence reference (PMID): 18931103. Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM0379 Burkholderia cenocepacia J2315 New PubMed reference: 22830644. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 22, 2009 BCAM0379 Burkholderia cenocepacia J2315 New gene name: atsR. New product name: adherence and T6 secretion system regulator AtsR. New product name confidence: Class 1. New homology: 19% identity to RetS [P. aeruginosa]. New evidence reference (PMID): 18316384. Literature review. Schell, M. A. University of Georgia, Athens, Georgia
Apr 30, 2018 BCAM0335 Burkholderia cenocepacia J2315 New gene name: virD4. New product name: pseudogene (virD4). New PubMed ID: 18931103. New comment: The virD4 homologue (BCAM0335) contains a frameshift mutation (PMID: Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0335 Burkholderia cenocepacia J2315 New comment : Contains frameshift mutation in J2315. New pathway: VirB4/D4 Type IV Secretion System. New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0335 Burkholderia cenocepacia J2315 New pathway: VirB4/D4 Type IV Secretion System. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0334 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0334 Burkholderia cenocepacia J2315 New gene name: virB11. New synonym for gene: bcvirB11. New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0334 Burkholderia cenocepacia J2315 New gene name: virB11. New alternate gene name: bcvirB11. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0333 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0333 Burkholderia cenocepacia J2315 New gene name: virB10. New synonym for gene: bcvirB10. New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0333 Burkholderia cenocepacia J2315 New gene name: virB10. New alternate gene name: bcvirB10. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0332 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0332 Burkholderia cenocepacia J2315 New gene name: virB9. New synonym for gene: bcvirB9. New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0332 Burkholderia cenocepacia J2315 New gene name: virB9. New alternate gene name: bcvirB9. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0331 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0331 Burkholderia cenocepacia J2315 New gene name: virB8. New synonym for gene: bcvirB8. New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0331 Burkholderia cenocepacia J2315 New gene name: virB8. New alternate gene name: bcvirB8. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0330 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0330 Burkholderia cenocepacia J2315 New gene name: virB7. New synonym for gene: bcvirB7. New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0330 Burkholderia cenocepacia J2315 New gene name: virB7. New alternate gene name: bcvirB7. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0329 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BCAM0329 Burkholderia cenocepacia J2315 New gene name: virB5. New synonym for gene: bcvirB5. New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM0329 Burkholderia cenocepacia J2315 New gene name: virB5. New alternate gene name: bcvirB5. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 30, 2018 BCAM0328 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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