| Apr 10, 2015 |
BCAM2630
|
Burkholderia cenocepacia
J2315 |
New gene name synonym: phuV. New product name confidence: Class 2. New PubMed ID: 17187664.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM2626
|
Burkholderia cenocepacia
J2315 |
New gene name: hmuR. New product name: TonB-dependent outer membrane heme receptor HmuR. New product name confidence: Class 2. New PubMed ID: 28625994. New PubMed ID: 22745846. New comment: Member of the hemin uptake (hmu) operon.Annotation transferred from: BGD:Bmul_3338.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM2552
|
Burkholderia cenocepacia
J2315 |
New product name: LlpE. New product name confidence: Class 3. New PubMed reference: 15837391.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2551
|
Burkholderia cenocepacia
J2315 |
New product name synonym: RND-10 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of ceoAB-opcM (rnd-10) operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump (RND-10); Major substrates of RND-10 are chloramphenicol, flouroquinolones and trimethoprim. New PMIDs: 14755343, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2550
|
Burkholderia cenocepacia
J2315 |
New product name synonym: RND-10 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of ceoAB-opcM (rnd-10) operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump (RND-10); Major substrates of RND-10 are chloramphenicol, flouroquinolones and trimethoprim. New PMIDs: 14755343, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM2549
|
Burkholderia cenocepacia
J2315 |
New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 1. New PubMed reference: 8834871.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2449
|
Burkholderia cenocepacia
J2315 |
New product name synonym: RND-10 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of ceoAB-opcM (rnd-10) operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump (RND-10); Major substrates of RND-10 are chloramphenicol, flouroquinolones and trimethoprim. New PMIDs: 14755343, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2418
|
Burkholderia cenocepacia
J2315 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 1. New comment: Comparative DNA sequence analysis of BCAM2418 genes (structural and promoter regions) of various B. cenocepacia isolates revealed that their lengths greatly vary according to the number of repetitive elements (PMID:32097539). New PMIDs: 22919579, 32097539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 22, 2009 |
BCAM2371
|
Burkholderia cenocepacia
J2315 |
New gene name: sigI. New product name: sigma factor 70 sigI. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Feb 4, 2013 |
BCAM2307
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0008237(IMP). New GO Accession: GO:0015628(IMP). New PubMed reference: 22848580. New PubMed reference: 16790782.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BCAM2307
|
Burkholderia cenocepacia
J2315 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0000279 .New subcellular localization PMID: 16790782 .
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 22, 2009 |
BCAM2307
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New subcellular localization: Extracellular. New subcellular localization confidence: Class 1. New evidence reference (PMID): 16790782.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Jan 25, 2011 |
BCAM2235
|
Burkholderia cenocepacia
J2315 |
New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2235
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2234
|
Burkholderia cenocepacia
J2315 |
New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2234
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2233
|
Burkholderia cenocepacia
J2315 |
New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2233
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2232
|
Burkholderia cenocepacia
J2315 |
New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2232
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2231
|
Burkholderia cenocepacia
J2315 |
New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2231
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2230
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(ISS). New PubMed reference: 9846750. New PubMed reference: 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2230
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New GO accession: GO:0033212 [ISS]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2228
|
Burkholderia cenocepacia
J2315 |
New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2228
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2227
|
Burkholderia cenocepacia
J2315 |
New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2227
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2226
|
Burkholderia cenocepacia
J2315 |
New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2226
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2225
|
Burkholderia cenocepacia
J2315 |
New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2225
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2224
|
Burkholderia cenocepacia
J2315 |
New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(IGC). New PubMed reference: 9846750. New PubMed reference: 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BCAM2224
|
Burkholderia cenocepacia
J2315 |
New gene name: fptA. New product name confidence: Class 1. New PubMed ID: 15102796.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2224
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2166
|
Burkholderia cenocepacia
J2315 |
New gene name: penR. New PMID: 26416862.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2165
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: beta-Lactam resistance. New GO Accession: GO:0008800(ISS). New PubMed reference: 19075063. New PubMed reference: 9371340. New PubMed reference: 18931103.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2165
|
Burkholderia cenocepacia
J2315 |
New gene name: penB. New product name confidence: Class 1. New PMIDs: 26416862, 19075063.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2165
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: beta-Lactam resistance. New GO accession: GO:0008800 [ISS]. New evidence reference (PMID): 19075063. New evidence reference (PMID): 9371340. New evidence reference (PMID): 18931103.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM2143
|
Burkholderia cenocepacia
J2315 |
New product name: BapA. New gene name: bapA. New product name confidence: Class 1. New synonym for gene: adhA. New synonym for CDS: AdhA. New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 1. New GO Accession: GO:0044010(IMP). New PubMed reference: 23185499. New PubMed reference: 16313619. New PubMed reference: 22950027.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2143
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0016337 [IMP]. New evidence reference (PMID): 16113259.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2143
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0016337(IMP). New PubMed reference: 16113259.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM2142
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New GO Accession: GO:0044010(IMP). New PubMed reference: 22950027.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM2141
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New GO Accession: GO:0044010(IMP). New PubMed reference: 22950027.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM2140
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New GO Accession: GO:0044010(IGC). New PubMed reference: 22950027.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2107
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New EC Number: 1.11.1.6;1.11.1.7. New GO Accession: GO:0004096(IDA). New GO Accession: GO:0004601(IDA). New PubMed reference: 17371508.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2107
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New EC Number: 1.11.1.6;1.11.1.7. New GO accession: GO:0004096 [IDA]. New GO accession: GO:0004601 [IDA]. New evidence reference (PMID): 17371508.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2059
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2059
|
Burkholderia cenocepacia
J2315 |
New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2058
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2058
|
Burkholderia cenocepacia
J2315 |
New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2057
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2057
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2056
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2056
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2055
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2055
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2054
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2054
|
Burkholderia cenocepacia
J2315 |
New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2053
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2053
|
Burkholderia cenocepacia
J2315 |
New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2052
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2052
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2051
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2051
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2050
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2050
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2049
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2049
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2048
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2048
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2047
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2047
|
Burkholderia cenocepacia
J2315 |
New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2046
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2046
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2045
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2045
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO accession: GO:0030254 [IGC]. New evidence reference (PMID): 11557147. New evidence reference (PMID): 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM1947
|
Burkholderia cenocepacia
J2315 |
New product name: RND-9 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-9 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-9; Major RND-9 substrate is tobramycin, chlorhexidine (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM1946
|
Burkholderia cenocepacia
J2315 |
New product name: RND-9 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-9 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-9; Major RND-9 substrate is tobramycin, chlorhexidine (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM1945
|
Burkholderia cenocepacia
J2315 |
New product name: RND-9 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-9 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-9; Major RND-9 substrate is tobramycin, chlorhexidine (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM1871
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 22624054.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM1870
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0052100(IMP). New GO Accession: GO:0071978(IMP). New PubMed reference: 11535791.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BCAM1870
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 16041013.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 22, 2009 |
BCAM1870
|
Burkholderia cenocepacia
J2315 |
New product name: acyl-homoserine lactone synthase CepI. New product name confidence: Class 1. New homology: 100% identity to CepI[B. cepacia K56-2] [accession number AF019654]. New evidence reference (PMID): 11402012.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 22, 2009 |
BCAM1870
|
Burkholderia cenocepacia
J2315 |
New homology: 90% identity to CepI[B. vietnamiensis G4]. New evidence reference (PMID): 17277056.
|
Literature review. Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta
|
| Feb 4, 2013 |
BCAM1868
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:1900192(IMP). New GO Accession: GO:0052100(IMP). New GO Accession: GO:0071978(IMP). New PubMed reference: 22950027. New PubMed reference: 11535791.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 22, 2009 |
BCAM1868
|
Burkholderia cenocepacia
J2315 |
New product name: transcriptional regulator CepR. New product name confidence: Class 1. New homology: 99% identity to CepR[B. cepacia K56-2]. New evidence reference (PMID): 11402012.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Feb 4, 2013 |
BCAM1867
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 16988222.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BCAM1867
|
Burkholderia cenocepacia
J2315 |
New product name: MgtC.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 22, 2009 |
BCAM1867
|
Burkholderia cenocepacia
J2315 |
New gene name: mgtC. New product name confidence: Class 1. New evidence reference (PMID): 16988222.
|
Literature review. Valvano, M. A. University of Western Ontario, London, Ontario
|
| Apr 30, 2018 |
BCAM1857
|
Burkholderia cenocepacia
J2315 |
New gene name: tecA. New product name: type VI secretion system effector protein TecA. New product name confidence: Class 1. New subcellular localization: Extracellular (Class 1). New subcellular localization evidence code (ECO): ECO:0000112. New subcellular localization PMID: 27133449. New PubMed ID: 27133449. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM1779
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: beta-Lactam resistance. New EC Number: 3.5.2.6. New GO Accession: GO:0008800(ISS). New PubMed reference: 12821450. New PubMed reference: 18931103.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM1779
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: beta-Lactam resistance. New EC Number: 3.5.2.6. New GO accession: GO:0008800 [ISS]. New evidence reference (PMID): 12821450. New evidence reference (PMID): 18931103.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM1711
|
Burkholderia cenocepacia
J2315 |
New gene name: paaK2. New product name: Paak2. New product name synonym: phenylacetate-CoA ligase. New product name confidence: Class 1. New PubMed ID: 21388965. New comment:
.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 22, 2009 |
BCAM1661
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfH. New product name: sigma factor 70 EcfH. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 30, 2018 |
BCAM1494
|
Burkholderia cenocepacia
J2315 |
New gene name: bceS1. New product name: two-component regulatory system sensor kinase BceS1. New product name confidence: Class 1. New PubMed ID: 25519693. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM1493
|
Burkholderia cenocepacia
J2315 |
New gene name: bceR1. New product name: two-component regulatory system response regulator BceR1. New product name confidence: Class 1. New PubMed ID: 25519693. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM1349
|
Burkholderia cenocepacia
J2315 |
New product name: CRP/FNR family transcriptional regulator. New product name confidence: Class 1. New GO Accession: GO:1900192(IMP). New GO Accession: GO:2001008(IMP). New GO Accession: GO:0009297(IMP). New PubMed reference: 21883527. New PubMed reference: 23281338.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM1341
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM1340
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|