Log of Annotation Updates

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Date Locus Tag Strain Description Submitter
Apr 30, 2018 BPSL3109 Burkholderia pseudomallei K96243 New gene name: tssJ-1. New product name: type VI secretion system protein TssJ-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185) Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS0688 Burkholderia pseudomallei K96243 New gene name: bprR. New product name: two-component response regulator BprR. New product name confidence: Class 1. New PubMed ID: 27147217. New comment: Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1547 Burkholderia pseudomallei K96243 New gene name: bsaM. New product name confidence: Class 1. New PubMed ID: 20951592. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSL1478 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS0913 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BCAL2407 Burkholderia cenocepacia J2315 New PubMed ID: 19525227. New comment: Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 AK34_RS07125 Burkholderia dolosa AU0158 New gene name: bceF. New product name: tyrosine kinase BceF. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 23435894. New PubMed ID: 25486990. New PubMed ID: 26590274. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4205. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSL3110 Burkholderia pseudomallei K96243 New gene name: tssK-1. New product name: type VI secretion system protein TssK-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185) Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS0687 Burkholderia pseudomallei K96243 New gene name: bprS. New product name: two-component sensor kinase BprS. New product name confidence: Class 1. New PubMed ID: 27147217. New comment: Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Jan 25, 2011 BTH_II1886 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssL-4. New product name: TssL-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BPSL0014 Burkholderia pseudomallei K96243 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1887 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssK-4. New product name: TssK-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BPSL0015 Burkholderia pseudomallei K96243 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1888 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssJ-4. New product name: TssJ-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BPSL0016 Burkholderia pseudomallei K96243 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1889 Burkholderia thailandensis E264 ATCC 700388 New gene name: tagD-4. New product name: TagD-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BPSL0017 Burkholderia pseudomallei K96243 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1890 Burkholderia thailandensis E264 ATCC 700388 New gene name: tagC-4. New product name: TagC-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BPSL0018 Burkholderia pseudomallei K96243 New product name confidence: Class 1. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IMP). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1891 Burkholderia thailandensis E264 ATCC 700388 New gene name: tagB-4. New product name: TagB-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3515 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(ISS). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1892 Burkholderia thailandensis E264 ATCC 700388 New gene name: tagAB-4. New product name: TagAB-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3516 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1893 Burkholderia thailandensis E264 ATCC 700388 New gene name: vgrG-4b. New product name: VgrG-4b. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3517 New comment : Contains frameshift mutation.. New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1894 Burkholderia thailandensis E264 ATCC 700388 New gene name: vgrG-4a. New product name: VgrG-4a. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3519 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1895 Burkholderia thailandensis E264 ATCC 700388 New gene name: clpV-4. New product name: ClpV-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3520 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1896 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssG-4. New product name: TssG-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3521 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1897 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssF-4. New product name: TssF-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3522 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1898 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssE-4. New product name: TssE-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3523 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1899 Burkholderia thailandensis E264 ATCC 700388 New gene name: hcp-4. New product name: Hcp-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3524 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1900 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssC-4. New product name: TssC-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3525 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1901 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssB-4. New product name: TssB-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3526 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II1902 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssA-4. New product name: TssA-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3527 Burkholderia cenocepacia J2315 New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(ISS). New PubMed reference: 10419967. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0855 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssM-5. New product name: TssM-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2045 Burkholderia cenocepacia J2315 New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0856 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssL-5. New product name: TssL-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2046 Burkholderia cenocepacia J2315 New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0857 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssk-5. New product name: Tssk-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2047 Burkholderia cenocepacia J2315 New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0858 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssJ-5. New product name: TssJ-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2048 Burkholderia cenocepacia J2315 New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1349 Burkholderia cenocepacia J2315 New product name: CRP/FNR family transcriptional regulator. New product name confidence: Class 1. New GO Accession: GO:1900192(IMP). New GO Accession: GO:2001008(IMP). New GO Accession: GO:0009297(IMP). New PubMed reference: 21883527. New PubMed reference: 23281338. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0859 Burkholderia thailandensis E264 ATCC 700388 New gene name: tagD-5. New product name: TagD-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2049 Burkholderia cenocepacia J2315 New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1330 Burkholderia cenocepacia J2315 New GO Accession: GO:0044010(IMP). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0860 Burkholderia thailandensis E264 ATCC 700388 New gene name: tagC-5. New product name: TagC-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2050 Burkholderia cenocepacia J2315 New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1331 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IMP). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0861 Burkholderia thailandensis E264 ATCC 700388 New gene name: tagB-5. New product name: TagB-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2051 Burkholderia cenocepacia J2315 New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1332 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IMP). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0862 Burkholderia thailandensis E264 ATCC 700388 New gene name: tagAB-5. New product name: TagAB-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2052 Burkholderia cenocepacia J2315 New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1333 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0863 Burkholderia thailandensis E264 ATCC 700388 New gene name: vgrG-5. New product name: VgrG-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2053 Burkholderia cenocepacia J2315 New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1334 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0864 Burkholderia thailandensis E264 ATCC 700388 New gene name: clpV-5. New product name: ClpV-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2054 Burkholderia cenocepacia J2315 New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1335 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0865 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssG-5. New product name: TssG-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2055 Burkholderia cenocepacia J2315 New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1336 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0866 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssF-5. New product name: TssF-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2056 Burkholderia cenocepacia J2315 New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1337 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0867 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssE-5. New product name: TssE-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2057 Burkholderia cenocepacia J2315 New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1338 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0868 Burkholderia thailandensis E264 ATCC 700388 New gene name: hcp-5. New product name: Hcp-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2058 Burkholderia cenocepacia J2315 New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1339 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0869 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssC-5. New product name: TssC-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAM2059 Burkholderia cenocepacia J2315 New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1340 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0870 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssB-5. New product name: TssB-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3110 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM1341 Burkholderia cenocepacia J2315 New comment :  Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0873 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssA-5. New product name: TssA-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3111 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM2140 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New GO Accession: GO:0044010(IGC). New PubMed reference: 22950027. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0249 Burkholderia thailandensis E264 ATCC 700388 New gene name: fha-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3112 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM2141 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New GO Accession: GO:0044010(IMP). New PubMed reference: 22950027. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0250 Burkholderia thailandensis E264 ATCC 700388 New gene name: tagI-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3113 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM2142 Burkholderia cenocepacia J2315 New product name confidence: Class 2. New GO Accession: GO:0044010(IMP). New PubMed reference: 22950027. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BTH_II0251 Burkholderia thailandensis E264 ATCC 700388 New gene name: tssJ-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6). Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Jan 25, 2011 BCAL3114 Burkholderia cenocepacia J2315 New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Feb 4, 2013 BCAM2143 Burkholderia cenocepacia J2315 New product name: BapA. New gene name: bapA. New product name confidence: Class 1. New synonym for gene: adhA. New synonym for CDS: AdhA. New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 1. New GO Accession: GO:0044010(IMP). New PubMed reference: 23185499. New PubMed reference: 16313619. New PubMed reference: 22950027. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
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