Apr 30, 2018 |
BPSL3109
|
Burkholderia pseudomallei
K96243 |
New gene name: tssJ-1. New product name: type VI secretion system protein TssJ-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS0688
|
Burkholderia pseudomallei
K96243 |
New gene name: bprR. New product name: two-component response regulator BprR. New product name confidence: Class 1. New PubMed ID: 27147217. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS1547
|
Burkholderia pseudomallei
K96243 |
New gene name: bsaM. New product name confidence: Class 1. New PubMed ID: 20951592.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSL1478
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BPSS0913
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BCAL2407
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 19525227. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
AK34_RS07125
|
Burkholderia dolosa
AU0158 |
New gene name: bceF. New product name: tyrosine kinase BceF. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 23435894. New PubMed ID: 25486990. New PubMed ID: 26590274. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4205.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSL3110
|
Burkholderia pseudomallei
K96243 |
New gene name: tssK-1. New product name: type VI secretion system protein TssK-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BPSS0687
|
Burkholderia pseudomallei
K96243 |
New gene name: bprS. New product name: two-component sensor kinase BprS. New product name confidence: Class 1. New PubMed ID: 27147217. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1886
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssL-4. New product name: TssL-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BPSL0014
|
Burkholderia pseudomallei
K96243 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1887
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssK-4. New product name: TssK-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BPSL0015
|
Burkholderia pseudomallei
K96243 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1888
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssJ-4. New product name: TssJ-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BPSL0016
|
Burkholderia pseudomallei
K96243 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1889
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagD-4. New product name: TagD-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BPSL0017
|
Burkholderia pseudomallei
K96243 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1890
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagC-4. New product name: TagC-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BPSL0018
|
Burkholderia pseudomallei
K96243 |
New product name confidence: Class 1. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IMP). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1891
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagB-4. New product name: TagB-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3515
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(ISS). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1892
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagAB-4. New product name: TagAB-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3516
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1893
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: vgrG-4b. New product name: VgrG-4b. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3517
|
|
New comment : Contains frameshift mutation.. New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1894
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: vgrG-4a. New product name: VgrG-4a. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3519
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1895
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: clpV-4. New product name: ClpV-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3520
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1896
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssG-4. New product name: TssG-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3521
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1897
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssF-4. New product name: TssF-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3522
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1898
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssE-4. New product name: TssE-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3523
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1899
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hcp-4. New product name: Hcp-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3524
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1900
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssC-4. New product name: TssC-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3525
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1901
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssB-4. New product name: TssB-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3526
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II1902
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssA-4. New product name: TssA-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3527
|
Burkholderia cenocepacia
J2315 |
New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(ISS). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0855
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssM-5. New product name: TssM-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2045
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0856
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssL-5. New product name: TssL-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2046
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0857
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssk-5. New product name: Tssk-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2047
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0858
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssJ-5. New product name: TssJ-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2048
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1349
|
Burkholderia cenocepacia
J2315 |
New product name: CRP/FNR family transcriptional regulator. New product name confidence: Class 1. New GO Accession: GO:1900192(IMP). New GO Accession: GO:2001008(IMP). New GO Accession: GO:0009297(IMP). New PubMed reference: 21883527. New PubMed reference: 23281338.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0859
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagD-5. New product name: TagD-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2049
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1330
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0044010(IMP). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0860
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagC-5. New product name: TagC-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2050
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1331
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IMP). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0861
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagB-5. New product name: TagB-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2051
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1332
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IMP). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0862
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagAB-5. New product name: TagAB-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2052
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1333
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0863
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: vgrG-5. New product name: VgrG-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2053
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1334
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0864
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: clpV-5. New product name: ClpV-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2054
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1335
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0865
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssG-5. New product name: TssG-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2055
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1336
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0866
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssF-5. New product name: TssF-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2056
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1337
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0867
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssE-5. New product name: TssE-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2057
|
Burkholderia cenocepacia
J2315 |
New pathway: Type III secretion system (T3SS). New GO Accession: GO:0030254(IGC). New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1338
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0868
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: hcp-5. New product name: Hcp-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2058
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1339
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0869
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssC-5. New product name: TssC-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAM2059
|
Burkholderia cenocepacia
J2315 |
New PubMed reference: 11557147. New PubMed reference: 15183868. New genomic context: type III secretion system (TTS) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1340
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0870
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssB-5. New product name: TssB-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3110
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM1341
|
Burkholderia cenocepacia
J2315 |
New comment : Expression is regulated by c-di-GMP and the Bcam1349 protein. New GO Accession: GO:0044010(IGC). New PubMed reference: 23281338. New genomic context: exopolysaccharide gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0873
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssA-5. New product name: TssA-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3111
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM2140
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New GO Accession: GO:0044010(IGC). New PubMed reference: 22950027.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0249
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: fha-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3112
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM2141
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New GO Accession: GO:0044010(IMP). New PubMed reference: 22950027.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0250
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagI-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3113
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM2142
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New GO Accession: GO:0044010(IMP). New PubMed reference: 22950027.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BTH_II0251
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssJ-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Jan 25, 2011 |
BCAL3114
|
Burkholderia cenocepacia
J2315 |
New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IGC). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
Feb 4, 2013 |
BCAM2143
|
Burkholderia cenocepacia
J2315 |
New product name: BapA. New gene name: bapA. New product name confidence: Class 1. New synonym for gene: adhA. New synonym for CDS: AdhA. New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 1. New GO Accession: GO:0044010(IMP). New PubMed reference: 23185499. New PubMed reference: 16313619. New PubMed reference: 22950027.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|