Apr 30, 2018 |
BMAA1542
|
Burkholderia mallei
ATCC 23344 |
New product name: type III secretion system export apparatus protein BsaQ (T3SS-3). New gene name synonym: sctV. New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 18654761. New PubMed ID: 16153244. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1543.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1542
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1543.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1541
|
Burkholderia mallei
ATCC 23344 |
New product name: chaperone protein BsaR (T3SS-3). New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 16164564. New PubMed ID: 14645290. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1542.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1541
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1542.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1540
|
Burkholderia mallei
ATCC 23344 |
New product name: type III secretion system ATPase BsaS (T3SS-3). New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 25605762. New PubMed ID: 20345664. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1541.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1540
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1541.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1539
|
Burkholderia mallei
ATCC 23344 |
New product name: type III secretion system stalk protein BsaT (T3SS-3). New product name confidence: Class 2. New PubMed ID: 28664152. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1540.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1539
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1540.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1538
|
Burkholderia mallei
ATCC 23344 |
New product name: needle length control protein BsaU (T3SS-3). New gene name synonym: sctP. New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 10944190. New PubMed ID: 16714590. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1538
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1537
|
Burkholderia mallei
ATCC 23344 |
New product name: type III secretion system cystoplasmic ring protein BsaV (T3SS-3). New gene name synonym: sctQ. New product name confidence: Class 2. New PubMed ID: 28664152. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1538.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1537
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1538.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1536
|
Burkholderia mallei
ATCC 23344 |
New product name: type III secretion system inner membrane export apparatus protein BsaW (T3SS-3). New gene name synonym: sctR. New product name confidence: Class 2. New PubMed ID: 28664152. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1537.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1536
|
|
New gene name: bsaW. New product name: BsaW. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1537.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1535
|
Burkholderia mallei
ATCC 23344 |
New product name: type III secretion system inner membrane export apparatus protein BsaX (T3SS-3). New gene name synonym: sctS. New product name confidence: Class 2. New PubMed ID: 28664152. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1536.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1535
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1536.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1534
|
Burkholderia mallei
ATCC 23344 |
New product name: type III secretion system inner membrane export apparatus protein BsaY (T3SS-3). New gene name synonym: sctT. New product name confidence: Class 2. New PubMed ID: 28664152. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1535.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1534
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1535.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1533
|
Burkholderia mallei
ATCC 23344 |
New product name: type III secretion system export apparatus protein BsaZ (T3SS-3). New gene name synonym: sctU. New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 18443088. New PubMed ID: 25635268. New PubMed ID: 12410823. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1534.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1533
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1534.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1532
|
Burkholderia mallei
ATCC 23344 |
New product name: type III secretion chaperone protein BicA (T3SS-3). New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 20345664. New PubMed ID: 25085508. New PubMed ID: 27997726. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1533.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1531
|
Burkholderia mallei
ATCC 23344 |
New product name: translocator protein BipB (T3SS-3). New gene name synonym: sctE. New product name confidence: Class 2. New PubMed ID: 28664152. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1532.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1531
|
|
New gene name synonym: ipaB. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18011.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1530
|
Burkholderia mallei
ATCC 23344 |
New product name: translocator protein BipC (T3SS-3). New gene name synonym: sctB. New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 27634329. New PubMed ID: 28028452. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1531.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1530
|
|
New product name confidence: Class 2. New PubMed ID: 20951592.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1529
|
Burkholderia mallei
ATCC 23344 |
New product name: regulatory protein BprA (T3SS-3). New product name confidence: Class 2. New PubMed ID: 28664152. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1530.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1529
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1530.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1528
|
Burkholderia mallei
ATCC 23344 |
New product name: type III secretion system needle tip protein BipD (T3SS-3). New gene name synonym: sctA. New product name confidence: Class 2. New PubMed ID: 28664152. New PubMed ID: 25635268. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1529.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1528
|
|
New gene name: bipD. New gene name synonym: ipaD. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18013.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1525
|
Burkholderia mallei
ATCC 23344 |
New product name: BapB (T3SS-3). New product name confidence: Class 2. New PubMed ID: 26624293. New PubMed ID: 28664152. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1527.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1524
|
Burkholderia mallei
ATCC 23344 |
New product name: type III secretion system effector protein BapC (T3SS-3). New product name confidence: Class 2. New subcellular localization: Extracellular (Class 2). New subcellular localization evidence code (ECO): ECO:0000250. New subcellular localization cross-ref: BGD:BPSS1526. New subcellular localization PMID: 26624293. New PubMed ID: 26624293. New PubMed ID: 28664152. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1526.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1523
|
Burkholderia mallei
ATCC 23344 |
New product name: guanine nucleotide exchange factor BopE (T3SS-3). New product name confidence: Class 2. New PubMed ID: 18052936. New PubMed ID: 18654761. New PubMed ID: 24626296. New PubMed ID: 17041850. New PubMed ID: 25635268. New PubMed ID: 28664152. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1525.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1523
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1525.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA1521
|
Burkholderia mallei
ATCC 23344 |
New product name: type III secretion system effector protein BopA (T3SS-3). New product name confidence: Class 2. New PubMed ID: 18483470. New PubMed ID: 28664150. New PubMed ID: 28664152. New comment: This gene is part of the Burkholderia mallei type III secretion system T3SS-3 gene locus..Annotation transferred from: BGD:BPSS1524.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1521
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1524.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1520
|
|
New product name: Chaperone protein BicP. New gene name synonym: sicP. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 21801239. Annotation transferred from: UniProtKB:P0CL16.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1518.1
|
|
New gene name: bprB. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1522.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1518
|
|
New gene name: bprD. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1521.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1517
|
|
New gene name: bprC. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1520.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA1517
|
|
New PubMed ID: 17555434.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0751
|
|
New gene name: bimB. New product name confidence: Class 2. New PubMed ID: 17555434. New genomic context: Burkholderia intracellular motility (bim) locus .
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0750
|
|
New gene name: bimC. New product name confidence: Class 2. New PubMed ID: 17555434. New genomic context: Burkholderia intracellular motility (bim) locus .
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0749
|
|
New PubMed ID: 17555434. New genomic context: Burkholderia intracellular motility (bim) locus .
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0749
|
|
New gene name: bimA. New product name: Burkholderia intracellular motility A, BimA. New product name confidence: Class 2. New PubMed ID: 15773977. Annotation transferred from: Locus Tag:BPSS1492.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0748
|
|
New gene name: bimD. New product name confidence: Class 1. New PubMed ID: 17555434. New PubMed ID: 16267310. New genomic context: Burkholderia intracellular motility (bim) locus .
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0747
|
|
New gene name: bimE. New product name confidence: Class 2. New PubMed ID: 17555434. New genomic context: Burkholderia intracellular motility (bim) locus .
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0746
|
|
New product name confidence: Class 1. New PubMed ID: 17555434.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0745
|
|
New gene name: virA. New product name confidence: Class 1. New PubMed ID: 17555434.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0744
|
|
New gene name: tssA. New product name synonym: `. New product name confidence: Class 2. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0743
|
|
New gene name: tssB. New product name confidence: Class 1. New PubMed ID: 17555434. New PubMed ID: 21300775. New PubMed ID: 24672321. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0742
|
|
New gene name: hcp1. New product name confidence: Class 1. New PubMed ID: 17555434. New PubMed ID: 21300775. New comment: Purified His-tagged BMAA0742 was recognized by glanders antiserum from a horse, a human and mice, indicating that this Hcp-family protein is produced in vivo during infection. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0741
|
|
New gene name: tssC. New product name confidence: Class 2. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0740
|
|
New gene name: tssD. New product name confidence: Class 1. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0739
|
|
New gene name: tssE. New product name confidence: Class 1. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0738
|
|
New gene name: clpV1. New product name confidence: Class 2. New PubMed ID: 17555434. New PubMed ID: 19284603. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0737
|
|
New gene name: vgrG1. New product name confidence: Class 2. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0735
|
|
New gene name: tssH. New product name confidence: Class 2. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0734
|
|
New gene name: tssI. New product name confidence: Class 2. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0733
|
|
New gene name: tssJ. New product name confidence: Class 2. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0732
|
|
New gene name: tssK. New product name confidence: Class 2. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0731
|
|
New gene name: tssL. New product name confidence: Class 2. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0729.1
|
|
New gene name: icmF1. New product name confidence: Class 2. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA0729
|
Burkholderia mallei
ATCC 23344 |
New gene name: tssM. New product name: deubiquitinase TssM. New product name confidence: Class 1. New subcellular localization: Extracellular (Class 1). New subcellular localization evidence code (ECO): ECO:000123. New subcellular localization PMID: 19168747. New PubMed ID: 19168747. New comment: An alternate start site identified in PMID:19168747 was used to replace the original start site.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0729
|
|
New end coordinate: 738159. New gene name: tssM. New product name confidence: Class 1. New PubMed ID: 19168747. New comment: New translation start site at 738159 bp was confirmed by immunoblot analysis and complementation studies (PMID: 19168747 ). New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0728
|
|
New gene name: tssN. New product name confidence: Class 1. New PubMed ID: 23800426. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0649
|
|
New gene name: boaA. New product name: Burkholderia oligomeric coiled-coil adhesin A, BoaA. New product name confidence: Class 2. New PubMed ID: 20920184. Annotation transferred from: Locus Tag:BMAA0649.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMAA0553
|
|
New PubMed ID: 23800426.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 30, 2018 |
BMAA0543
|
Burkholderia mallei
ATCC 23344 |
New gene name: pacL. New product name: PacL. New product name synonym: putative 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. New product name confidence: Class 2. New PubMed ID: 21296885. New PubMed ID: 18776009. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P3J4.
|
Geoff Winsor, Simon Fraser University. Transferred annotation from the B. cenocepacia annotation provided by D. Lavellee and S. Cardona.
|
Apr 30, 2018 |
BMAA0543
|
Burkholderia mallei
ATCC 23344 |
New PubMed ID: 21296885. New PubMed ID: 18776009. Annotation transferred from: UniProtKB:Q5P3J4.
|
Geoff Winsor, Simon Fraser University. Transferred annotation from the B. cenocepacia annotation provided by D. Lavellee and S. Cardona.
|
Apr 10, 2015 |
BMA1027
|
|
New gene name: bpaC. New product name: trimeric autotransporter adhesin, BpaC. New product name confidence: Class 1. New PubMed ID: 23716608.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A1776
|
Burkholderia mallei
NCTC 10247 |
New gene name: boaA. New product name: Burkholderia oligomeric coiled-coil adhesin A, BoaA. New product name confidence: Class 2. New PubMed ID: 20920184. Annotation transferred from: Locus Tag:BPSS0796.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A1666
|
Burkholderia mallei
NCTC 10247 |
New product name: Burkholderia intracellular motility A, BimA. New product name confidence: Class 2. New PubMed ID: 15773977. Annotation transferred from: Locus Tag:BPSS1492.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0775
|
Burkholderia mallei
NCTC 10247 |
New gene name: bopC. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1516.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0770
|
Burkholderia mallei
NCTC 10247 |
New gene name: bprC. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1520.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0768
|
Burkholderia mallei
NCTC 10247 |
New gene name: bprD. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1521.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0766
|
Burkholderia mallei
NCTC 10247 |
New gene name: bprB. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1522.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0765
|
Burkholderia mallei
NCTC 10247 |
New product name: Chaperone protein BicP. New gene name synonym: sicP. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 21801239. Annotation transferred from: UniProtKB:P0CL16.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0764
|
Burkholderia mallei
NCTC 10247 |
New gene name: bopA. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1524.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0761
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1525.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0757
|
Burkholderia mallei
NCTC 10247 |
New gene name: bipD. New gene name synonym: ipaD. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18013.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0755
|
Burkholderia mallei
NCTC 10247 |
New gene name: bprA. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1530.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0754
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0753
|
Burkholderia mallei
NCTC 10247 |
New gene name synonym: ipaB. New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 17367391. Annotation transferred from: UniProtKB:P18011.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0752
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. New PubMed ID: 11296219. Annotation transferred from: Locus Tag:BPSS1533.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0751
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1534.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0750
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1535.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0749
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1536.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0748
|
Burkholderia mallei
NCTC 10247 |
New gene name: bsaW. New product name: BsaW. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1537.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0747
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1538.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0746
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0745
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1540.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0744
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1541.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0743
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1542.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0742
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1543.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0741
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1544.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0740
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1545.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0739
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1546.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0736
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1547.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0735
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1548.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
Apr 10, 2015 |
BMA10247_A0734
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1549.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|