| Strain Overview | |
|---|---|
| Organism Name | Burkholderia multivorans DDS 15A-1 |
| Species | Burkholderia multivorans |
| Strain | DDS 15A-1 |
| Description/Title | Microbe sample from Burkholderia multivorans |
| Annotated Genes | 6389 |
| Partial Genes | 69 |
| Host Information | |
|---|---|
| Host Species Taxonomic Name |
| Geographic Location | |
|---|---|
| Location Name | Australia |
| Isolation Source | aerosol |
| Sample Provider | |
|---|---|
| Name | Hajnalka Daligault |
| hajkis@lanl.gov | |
| Institution | Los Alamos National Laboratory |
| Date Collected | 2005 |
| Database | Scheme | Sequence Type | Alleles | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| PubMLST | bcc | 802 |
|
|||||||
| Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). | ||||||||||
| Assembly | |
|---|---|
| Assembly DB |
RefSeq
|
| Assembly Accession | Assembly Status | latest |
| Scaffolds | |
| Contigs | |
| Contig N50 | |
| Assembly Level | Complete Genome |
| Percent GC |
| Cross-References | |
|---|---|
| NCBI BioSample Accession | SAMN02848467 |
| NCBI Taxonomy ID | 87883 |
| NCBI Bioprojects |
| Related Data | |
|---|---|
| Additional Genome Project Info | |
| Sequencing Information | |
| Genome Assembly Information |
| Feature | Count |
|---|---|
| gene | 6389 |
| CDS | 6307 |
| pseudo | 115 |
| tRNA | 66 |
| rRNA | 15 |
| ncRNA | 1 |
| Localization | Count |
|---|---|
| Cytoplasmic | 2874 |
| Cytoplasmic Membrane | 1378 |
| Periplasmic | 216 |
| Outer Membrane | 146 |
| Extracellular | 62 |
| Unknown | 1564 |
| Unknown (This protein may have multiple localization sites) | 173 |
| Flagellar | 13 |
| Fimbrial | 4 |
| T3SS | 1 |
| Name | Length | GC | |
|---|---|---|---|
| Burkholderia multivorans strain DDS 15A-1 chromosome 1, complete sequence. | 3603686 bp | 66.8% |
Replicon details
|
| Burkholderia multivorans strain DDS 15A-1 chromosome 2, complete sequence. | 2541526 bp | 67.0% |
Replicon details
|
| Burkholderia multivorans strain DDS 15A-1 chromosome 3, complete sequence. | 1136655 bp | 65.1% |
Replicon details
|
| Genomic | ORF DNA | Intergenic | Amino Acid |
| TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF |