Strain Overview | |
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Organism Name | Burkholderia xenovorans LB400 (Paraburkholderia) |
Species | Burkholderia xenovorans |
Strain | LB400 |
Description/Title | Sample from Burkholderia xenovorans LB400 |
Annotated Genes | 8637 |
Partial Genes |
Host Information | |
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Host Species Taxonomic Name |
Geographic Location |
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Sample Provider | |
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Name | |
johnston@ncbi.nlm.nih.gov | |
Institution | NCBI |
Date Collected |
Database | Scheme | Sequence Type | Alleles | |
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Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). |
Assembly | |
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Assembly DB |
RefSeq
|
Assembly Accession | Assembly Status | latest |
Scaffolds | |
Contigs | |
Contig N50 | |
Assembly Level | Complete Genome |
Percent GC |
Cross-References | |
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NCBI BioSample Accession | SAMN02598451 |
NCBI Taxonomy ID | 266265 |
NCBI Bioprojects |
Related Data | |
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Additional Genome Project Info | |
Sequencing Information | |
Genome Assembly Information |
Feature | Count |
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gene | 9043 |
CDS | 8679 |
tRNA | 65 |
pseudo | 26 |
rRNA | 18 |
ncRNA | 2 |
tmRNA | 1 |
Localization | Count |
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Cytoplasmic | 3741 |
Cytoplasmic Membrane | 1830 |
Periplasmic | 249 |
Outer Membrane | 216 |
Extracellular | 97 |
Unknown | 2580 |
Unknown (This protein may have multiple localization sites) | 215 |
Flagellar | 24 |
Fimbrial | 5 |
T3SS | 2 |
Name | Length | GC | |
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Burkholderia xenovorans LB400 chromosome 1, complete sequence. | 4895836 bp | 62.8% |
Replicon details
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Burkholderia xenovorans LB400 chromosome 2, complete sequence. | 3363523 bp | 62.8% |
Replicon details
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Burkholderia xenovorans LB400 chromosome 3, complete sequence. | 1471779 bp | 61.7% |
Replicon details
|
Genomic | ORF DNA | Intergenic | Amino Acid |
TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF | Orthologs |