Motif View

Internal ID 1761257
Source Database TransTermHP TERM 1016
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1016
Sequence GCCACCTGGCCGTCGGGCCGGGTGGC
Look for more occurrences
Start 3243830
End 3243855
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCCACCAAAGAAAAA(5' tail) GCCACCCGGCC(5' stem) CGAC(loop) GGCCAGGTGGC(3' stem) TTTTTCGCATGACCG(3' tail). Confidence: 100. opp_overlap 3243830

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685