Burkholderia glumae BGR1, bglu_2g14480 (tofM)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia glumae BGR1
GCF_000022645.2|latest
Locus Tag
bglu_2g14480
NCBI Locus TagBGLU_RS24860
Name
tofM
Replicon chromosome 2
Genomic location 1848141 - 1848593 (+ strand)

Cross-References

RefSeq WP_015877500.1
GI
Entrez 7904924
NCBI Locus Tag BGLU_RS24860
NCBI Old Locus Tag bglu_2g14480
RefSeq WP_015877500.1,GeneID

Product

Feature Type CDS
Coding Frame 1
Product Name
TofM
Synonyms
Evidence for Translation
Charge (pH 7) -4.39
Kyte-Doolittle Hydrophobicity Value -0.023
Molecular Weight (kDa) 16290.3
Isoelectric Point (pI) 5.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 6 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG003719 (634 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: bglu_2g14480
Search term: tofM
Search term: TofM

Human Homologs

References

Dissection of quorum-sensing genes in Burkholderia glumae reveals non-canonical regulation and the new regulatory gene tofM for toxoflavin production.
Chen R, Barphagha IK, Karki HS, Ham JH
PLoS One 2012;7(12):e52150
PubMed ID: 23284909