Strain |
Burkholderia cenocepacia J2315
GCF_000009485.1|latest |
Locus Tag |
BCAM0001
|
NCBI Locus Tag | QU43_RS54400 |
Name |
ecfJ
|
Replicon | chromosome 2 |
Genomic location | 230 - 829 (+ strand) |
RefSeq | WP_006485145.1 |
GI | 206561869 |
Entrez | 6927816 |
GI | 206561869 |
INSDC | CAO00537.1 |
NCBI Locus Tag | QU43_RS54400 |
NCBI Old Locus Tag | BCAM0001 |
RefSeq | WP_006485145.1,GeneID |
UniParc | UPI0001765FC0 |
UniProtKB Acc | B3KYE4 |
UniProtKB ID | B3KYE4_BURCJ |
UniRef100 | UniRef100_A0A0D1DKE1 |
UniRef50 | UniRef50_U2FGY1 |
UniRef90 | UniRef90_A2WH75 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RNA polymerase sigma factor
|
Synonyms |
sigma factor 70 EcfJ |
Evidence for Translation | |
Charge (pH 7) | -4.92 |
Kyte-Doolittle Hydrophobicity Value | -0.286 |
Molecular Weight (kDa) | 22735.6 |
Isoelectric Point (pI) | 5.33 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 212 genera
|
Burkholderia Ortholog Group |
BG004414 (617 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BCAM0001
Search term: ecfJ
Search term: RNA polymerase sigma factor
|
Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability.
Menard A, de Los Santos PE, Graindorge A, Cournoyer B
BMC Genomics 2007 Sep 4;8:308
PubMed ID: 17784948
|