Strain |
Burkholderia cenocepacia J2315
GCF_000009485.1|latest |
Locus Tag |
BCAL3486
|
NCBI Locus Tag | QU43_RS54160 |
Name |
ecfM
|
Replicon | chromosome 1 |
Genomic location | 3823432 - 3824313 (- strand) |
RefSeq | WP_006487324.1 |
GI | 206561823 |
Entrez | 6933239 |
GI | 206561823 |
INSDC | CAR53809.1 |
NCBI Locus Tag | QU43_RS54160 |
NCBI Old Locus Tag | BCAL3486 |
RefSeq | WP_006487324.1,GeneID |
UniParc | UPI00017B99D3 |
UniProtKB Acc | B4E6L6 |
UniProtKB ID | B4E6L6_BURCJ |
UniRef100 | UniRef100_A0A0D1DGY3 |
UniRef50 | UniRef50_Q92XC9 |
UniRef90 | UniRef90_A0K2P6 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RNA polymerase sigma factor SigJ
|
Synonyms |
sigma factor 70 EcfM |
Evidence for Translation | |
Charge (pH 7) | -4.88 |
Kyte-Doolittle Hydrophobicity Value | -0.200 |
Molecular Weight (kDa) | 32741.1 |
Isoelectric Point (pI) | 6.06 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 168 genera
|
Burkholderia Ortholog Group |
BG000010 (703 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BCAL3486
Search term: ecfM
Search term: RNA polymerase sigma factor SigJ
|
Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability.
Menard A, de Los Santos PE, Graindorge A, Cournoyer B
BMC Genomics 2007 Sep 4;8:308
PubMed ID: 17784948
|