Burkholderia cenocepacia J2315, BCAL3426 (slyB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL3426
NCBI Locus TagQU43_RS53830
Name
slyB
Replicon chromosome 1
Genomic location 3751841 - 3752314 (+ strand)

Cross-References

RefSeq WP_006476977.1
GI 206561763
Entrez 6933210
GI 206561763
INSDC CAR53749.1
NCBI Locus Tag QU43_RS53830
NCBI Old Locus Tag BCAL3426
RefSeq WP_006476977.1,GeneID
UniParc UPI000052DAB6
UniProtKB Acc B4E5V6
UniProtKB ID B4E5V6_BURCJ
UniRef100 UniRef100_B1JVB6
UniRef50 UniRef50_A9AI45
UniRef90 UniRef90_A9AI45

Product

Feature Type CDS
Coding Frame 1
Product Name
SlyB
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) 3.19
Kyte-Doolittle Hydrophobicity Value 0.289
Molecular Weight (kDa) 15356.3
Isoelectric Point (pI) 10.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 2
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 85 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000486 (656 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL3426
Search term: slyB
Search term: SlyB

Human Homologs

References

The SlyB outer membrane lipoprotein of Burkholderia multivorans contributes to membrane integrity.
Plesa M, Hernalsteens JP, Vandenbussche G, Ruysschaert JM, Cornelis P
Res Microbiol 2006 Jul-Aug;157(6):582-92
PubMed ID: 16500084