Burkholderia cenocepacia J2315, BCAL3151 (ecfF)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL3151
NCBI Locus Tag	QU43_RS52475
Name	ecfF
Replicon	chromosome 1
Genomic location	3440408 - 3441190 (- strand)

Cross-References

RefSeq	WP_012492912.1
GI	206561495
Entrez	6933023
GI	206561495
INSDC	CAR53474.1
NCBI Locus Tag	QU43_RS52475
NCBI Old Locus Tag	BCAL3151
RefSeq	WP_012492912.1,GeneID
UniParc	UPI00017B95DE
UniProtKB Acc	B4ECU2
UniProtKB ID	B4ECU2_BURCJ
UniRef100	UniRef100_A0A0D1C454
UniRef50	UniRef50_A4JBZ8
UniRef90	UniRef90_A0K531

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein Product Name Confidence: Class 2
Synonyms	sigma factor 70 EcfF
Evidence for Translation
Charge (pH 7)	3.17
Kyte-Doolittle Hydrophobicity Value	-0.305
Molecular Weight (kDa)	28048.3
Isoelectric Point (pI)	8.88

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 55 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000710 (631 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL3151 Search term: ecfF

Human Homologs

References

Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability. Menard A, de Los Santos PE, Graindorge A, Cournoyer B BMC Genomics 2007 Sep 4;8:308 PubMed ID: 17784948