Burkholderia cenocepacia J2315, BCAL0469 (rsmB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
Locus Tag
BCAL0469
NCBI Locus TagQU43_RS38905
Name
rsmB
Replicon chromosome 1
Genomic location 517999 - 519390 (+ strand)

Cross-References

RefSeq WP_006485768.1
GI 206558871
Entrez 6930988
GI 206558871
INSDC CAR50780.1
NCBI Locus Tag QU43_RS38905
NCBI Old Locus Tag BCAL0469
RefSeq WP_006485768.1,GeneID
UniParc UPI00017B8F75
UniProtKB Acc B4E7W1
UniProtKB ID B4E7W1_BURCJ
UniRef100 UniRef100_B4E7W1
UniRef50 UniRef50_B4E7W1
UniRef90 UniRef90_B4E7W1

Product

Feature Type CDS
Coding Frame 1
Product Name
ribosomal RNA small subunit methyltransferase B
Synonyms
Evidence for Translation
Charge (pH 7) 1.52
Kyte-Doolittle Hydrophobicity Value 0.021
Molecular Weight (kDa) 49420.7
Isoelectric Point (pI) 7.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 580 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002951 (653 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0469
Search term: rsmB

Human Homologs

Ensembl 86, assembly GRCh38.p7
NOP2/Sun RNA methyltransferase family member 3 [Source:HGNC Symbol;Acc:HGNC:26208]
E-value: 6.8e-06
Percent Identity: 26.0

References

No references are associated with this feature.