Burkholderia cenocepacia J2315, BCAL0260 (rpoA)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0260
NCBI Locus Tag	QU43_RS37835
Name	rpoA
Replicon	chromosome 1
Genomic location	287861 - 288838 (+ strand)

Cross-References

RefSeq	WP_006477176.1
GI	206558667
Entrez	6934103
GI	206558667
INSDC	CAR50571.1
NCBI Locus Tag	QU43_RS37835
NCBI Old Locus Tag	BCAL0260
RefSeq	WP_006477176.1,GeneID
UniParc	UPI00002C2233
UniProtKB Acc	B4E5E6
UniProtKB ID	RPOA_BURCJ
UniRef100	UniRef100_B1YRQ5
UniRef50	UniRef50_A1JS01
UniRef90	UniRef90_Q2SU53

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA-directed RNA polymerase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7)	-4.36
Kyte-Doolittle Hydrophobicity Value	-0.138
Molecular Weight (kDa)	35696.7
Isoelectric Point (pI)	5.95

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 589 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000283 (655 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0260 Search term: rpoA Search term: DNA-directed RNA polymerase subunit alpha

Human Homologs

References