Burkholderia cenocepacia J2315, BCAL0252 (rpmD)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0252
NCBI Locus Tag	QU43_RS37795
Name	rpmD
Replicon	chromosome 1
Genomic location	283726 - 283908 (+ strand)

Cross-References

RefSeq	WP_006400644.1
GI	206558659
Entrez	6934104
GI	206558659
INSDC	CAR50563.1
NCBI Locus Tag	QU43_RS37795
NCBI Old Locus Tag	BCAL0252
RefSeq	WP_006400644.1,GeneID
UniParc	UPI000052EAE1
UniProtKB Acc	B4E5D8
UniProtKB ID	RL30_BURCJ
UniRef100	UniRef100_B1YRP7
UniRef50	UniRef50_P44366
UniRef90	UniRef90_Q1LI55

Product

Feature Type	CDS
Coding Frame	1
Product Name	50S ribosomal protein L30
Synonyms
Evidence for Translation
Charge (pH 7)	7.22
Kyte-Doolittle Hydrophobicity Value	-0.045
Molecular Weight (kDa)	6634.8
Isoelectric Point (pI)	11.62

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 449 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000275 (655 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0252 Search term: rpmD Search term: 50S ribosomal protein L30

Human Homologs

References