Burkholderia cenocepacia J2315, BCAL0249 (rplF)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0249
NCBI Locus Tag	QU43_RS37780
Name	rplF
Replicon	chromosome 1
Genomic location	282269 - 282799 (+ strand)

Cross-References

RefSeq	WP_006477184.1
GI	206558656
Entrez	6934107
GI	206558656
INSDC	CAR50560.1
NCBI Locus Tag	QU43_RS37780
NCBI Old Locus Tag	BCAL0249
RefSeq	WP_006477184.1,GeneID
UniParc	UPI000052E58C
UniProtKB Acc	B4E5D5
UniProtKB ID	RL6_BURCJ
UniRef100	UniRef100_Q1BRW3
UniRef50	UniRef50_Q9K1I3
UniRef90	UniRef90_Q2SU42

Product

Feature Type	CDS
Coding Frame	1
Product Name	50S ribosomal protein L6
Synonyms
Evidence for Translation
Charge (pH 7)	7.71
Kyte-Doolittle Hydrophobicity Value	-0.255
Molecular Weight (kDa)	18688.5
Isoelectric Point (pI)	10.29

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000272 (655 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0249 Search term: rplF Search term: 50S ribosomal protein L6

Human Homologs

References